DRSC/TRiP Functional Genomics Resources

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Protein Alignment CPT2 and cpt-1

DIOPT Version :9

Sequence 1:NP_647756.1 Gene:CPT2 / 38355 FlyBaseID:FBgn0035383 Length:667 Species:Drosophila melanogaster
Sequence 2:NP_496721.2 Gene:cpt-1 / 174912 WormBaseID:WBGene00012907 Length:779 Species:Caenorhabditis elegans


Alignment Length:673 Identity:201/673 - (29%)
Similarity:327/673 - (48%) Gaps:100/673 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 PTLY-FQRSLPRLPIPLLENSCRRFLEATKPLLSPAEQAQTQQTVEQFRQGIGMEL--HAKLKSH 98
            |.|: ||.:|||||:|.|:::.|:.|.:.||:||..|..:.:...|:||:|:|..|  :..|||.
 Worm   163 PMLHSFQGALPRLPLPNLDDTVRKHLLSMKPILSDEEFQELEFLSERFRKGVGRRLQRYLTLKSW 227

  Fly    99 DAENKHTSYISQPWFD-MYLADRAPLPLNYNPLLVMKSDARPEY--QQQVVRATNLIISSLRFWR 160
            .:.|    |::..|.: :|:..|:|:.:|.|   ....|...|:  |.|..||.||..:||:|.|
 Worm   228 FSSN----YVTDWWEEFVYMRQRSPIMINSN---YYGFDTLNEHPTQNQASRAANLTYTSLQFRR 285

  Fly   161 SLQADLLEPEVYHMNAKKSDTSSYRRWMKVAPKAFATYASYAFKAFPLDMSQYNRLFGTSRIPRI 225
            .:....:.|                  ..::|:.          ..|....||.|||.|.|:|..
 Worm   286 MVDRQEVSP------------------FSISPRT----------KVPFCTMQYERLFNTCRVPGE 322

  Fly   226 GKDELVQSPDAKHILVMRRGHMYAVNVLDSSGYIESPSVILGRLRAVLKLDADREAASVPLGVLT 290
            ..|.|:...|||||.|..||..:.:.|.:....:|:..:.: :..|:|....:.....:.|..||
 Worm   323 EVDRLLHWDDAKHIAVYCRGVWFKLIVHNGKRLLEACELQV-QYDAILAHTHEPSEGEMHLASLT 386

  Fly   291 SGQRDEWAKTRQ-HFVSNTKNADLLEREVDAALFCVCLDGEEDGVFNENQQEP-LLKH----LLA 349
            :|:|.:|||||: ||.|......|  .:::.|.|.|.||.||.   :.:.|:| .|.|    ||.
 Worm   387 AGERADWAKTRRAHFRSGVNKTSL--NDIERAAFVVILDDEET---HYDPQDPSKLDHWAHNLLH 446

  Fly   350 GKAQNRWFDKSISLLISADGTTAINFEHSWGDGVAVLRYFNE--LYKDTLKQPFVSTETVHTPAE 412
            |||.:||||||.:|:||.:|...||.|||||| .||:.:|.|  |.:|.:   |:..:. :...:
 Worm   447 GKAHDRWFDKSFNLIISKNGHVGINTEHSWGD-AAVMAHFTEWSLLQDIV---FIGYDE-NGRCK 506

  Fly   413 GD-FSNVRP--INFEIDDATKSAVSEAYNKNASIVDNLDMNVLKYPHINKPTCKQYGLSPDSIIQ 474
            |: ...:.|  :.:||.......:.::.....:::.:::|::|.:....|...|:..:|||:.:|
 Worm   507 GEPKEKLTPERLKWEIPAPALDQIRKSMEVANALIADVEMSLLVWTDYGKGFAKKLKVSPDAFLQ 571

  Fly   475 LSFQLAYRQAYSGYVGSYESCSTSAFRHGRTETMRPCTNATRDFCEAILQPERSKPSAGELRAMI 539
            ::.|..|.:..:.:..:||:..|..||.|||||:|.||..:.||..::|  :.||.....|:.:.
 Worm   572 MTLQYTYFKNQNKFSLTYEASMTRLFREGRTETVRSCTVQSSDFVRSML--DASKTPQDRLQLLR 634

  Fly   540 DNCSKVHGQLTKEAAMGQGFDRHLFAL----RHTAQKEGIP-----IPDLY------------ET 583
            ..|.| |.:|.::|..|||.|||||||    |:.  :|..|     .|..|            |.
 Worm   635 KACDK-HQELYRDAMCGQGVDRHLFALYVIKRYL--EEESPFFDNIFPPTYLLSTSQTPMNQCEA 696

  Fly   584 EAYKRINNNI-ISTSTLGSDALLAGSFGPVVKNGFGIGYSIQNDFAGAIVTTYKNQAD---GKVF 644
            :| |.::|.: :...|.|      |.||||...|:|:.|.:..:...:...:.|..||   .:.|
 Worm   697 DA-KGLSNEVRLRLITAG------GGFGPVADRGYGVSYIVAGEDTLSFHISSKRSADNTSSREF 754

  Fly   645 IDSLESAFDKICAVIQQSSSSKK 667
            .:.|:.:.:.:..:.:...:.||
 Worm   755 REELKRSLNDMKKLAEAIEAPKK 777

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CPT2NP_647756.1 Carn_acyltransf 45..655 CDD:279140 195/650 (30%)
cpt-1NP_496721.2 CPT_N 1..46 CDD:293093
Carn_acyltransf 172..766 CDD:279140 195/651 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D559299at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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