DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CPT2 and CPT1B

DIOPT Version :9

Sequence 1:NP_647756.1 Gene:CPT2 / 38355 FlyBaseID:FBgn0035383 Length:667 Species:Drosophila melanogaster
Sequence 2:NP_001138607.1 Gene:CPT1B / 1375 HGNCID:2329 Length:772 Species:Homo sapiens


Alignment Length:624 Identity:169/624 - (27%)
Similarity:291/624 - (46%) Gaps:80/624 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 LQCSKLPTLY-FQRSLPRLPIPLLENSCRRFLEATKPLLSPAEQAQTQQTVEQFRQGIG--MELH 92
            |..|:.|.|| ||.|||:||:|.:..:.:|:||:.:|||...|..:.:...::|:....  ::.:
Human   158 LLSSRHPMLYSFQTSLPKLPVPRVSATIQRYLESVRPLLDDEEYYRMELLAKEFQDKTAPRLQKY 222

  Fly    93 AKLKSHDAENKHTSYISQPWFD-MYLADRAPLPLNYN-----PLLVMKSDARPEYQQQVVRATNL 151
            ..|||..|.|    |:|..|.: :||..|:||.:|.|     .:|:..:|.      |..|..|:
Human   223 LVLKSWWASN----YVSDWWEEYIYLRGRSPLMVNSNYYVMDLVLIKNTDV------QAARLGNI 277

  Fly   152 IISSLRFWRSLQADLLEPEVYHMNAKKSDTSSYRRWMKVAPKAFATYASYAFKAFPLDMSQYNRL 216
            |.:.:.:.|.|..:.::|.:                              |....|:...|..|:
Human   278 IHAMIMYRRKLDREEIKPVM------------------------------ALGIVPMCSYQMERM 312

  Fly   217 FGTSRIPRIGKDELVQSPDAKHILVMRRGHMYAVNVLDSSGYIESPSVILGRLRAVLKLDADREA 281
            |.|:|||....|.|....|::|:.|..:|..:.:.:.:.:..:: |..:..:.:.:|...:..:.
Human   313 FNTTRIPGKDTDVLQHLSDSRHVAVYHKGRFFKLWLYEGARLLK-PQDLEMQFQRILDDPSPPQP 376

  Fly   282 ASVPLGVLTSGQRDEWAKTRQHFVSNTKNADLLEREVDAALFCVCLDGEEDGVFNENQQEPLL-- 344
            ....|..||:|.|.|||:.||.|.|:.||...|| .::.|.|.|.||.|......|::....|  
Human   377 GEEKLAALTAGGRVEWAQARQAFFSSGKNKAALE-AIERAAFFVALDEESYSYDPEDEASLSLYG 440

  Fly   345 KHLLAGKAQNRWFDKSISLLISADGTTAINFEHSWGDGVAVLRYFNELYKDTLKQPFVSTETVHT 409
            |.||.|...|||||||.:|:...:|...:|.||:|.| ..::.:..|....|.......|||.|.
Human   441 KALLHGNCYNRWFDKSFTLISFKNGQLGLNAEHAWAD-APIIGHLWEFVLGTDSFHLGYTETGHC 504

  Fly   410 PAEGDFSNVRP--INFEIDDATKSAVSEAYNKNASIVDNLDMNVLKYPHINKPTCKQYGLSPDSI 472
            ..:.:.:...|  :.::|....::.:..:|....::.|::::...::....|...|:...|||:.
Human   505 LGKPNPALAPPTRLQWDIPKQCQAVIESSYQVAKALADDVELYCFQFLPFGKGLIKKCRTSPDAF 569

  Fly   473 IQLSFQLAYRQAYSGYVGSYESCSTSAFRHGRTETMRPCTNATRDFCEAILQPERSKPSAGELRA 537
            :|::.|||:.:....:..:||:..|..||.|||||:|.||:.:..|.:|:::...:|   .:||.
Human   570 VQIALQLAHFRDRGKFCLTYEASMTRMFREGRTETVRSCTSESTAFVQAMMEGSHTK---ADLRD 631

  Fly   538 MIDNCSKVHGQLTKEAAMGQGFDRHLFALRHTAQKEGIPIPDLYE--TEAYKRINNNIISTSTLG 600
            :....:|.|..:.:.|..|.|.|||||.|...::..|:..|.|.|  :|.::      :|||.:.
Human   632 LFQKAAKKHQNMYRLAMTGAGIDRHLFCLYLVSKYLGVSSPFLAEVLSEPWR------LSTSQIP 690

  Fly   601 SDAL-------------LAGSFGPVVKNGFGIGYSIQND 626
            ...:             ..|.||||..:|:|:.|.|..:
Human   691 QSQIRMFDPEQHPNHLGAGGGFGPVADDGYGVSYMIAGE 729

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CPT2NP_647756.1 Carn_acyltransf 45..655 CDD:279140 161/609 (26%)
CPT1BNP_001138607.1 CPT_N 1..46 CDD:293093
Carn_acyltransf 173..761 CDD:279140 161/609 (26%)
Coenzyme A binding. /evidence=ECO:0000250 555..567 3/11 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D559299at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.920

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