DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CPT2 and cpt1a

DIOPT Version :10

Sequence 1:NP_647756.1 Gene:CPT2 / 38355 FlyBaseID:FBgn0035383 Length:667 Species:Drosophila melanogaster
Sequence 2:XP_004913491.2 Gene:cpt1a / 100490391 XenbaseID:XB-GENE-29077111 Length:778 Species:Xenopus tropicalis


Alignment Length:675 Identity:189/675 - (28%)
Similarity:317/675 - (46%) Gaps:95/675 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 LQCSKLPTLY-FQRSLPRLPIPLLENSCRRFLEATKPLLSPAEQAQTQQTVEQFRQGIG--MELH 92
            |...:.|.|| ||.||||||:|.::::.:|:|::.|||:...:..:.:...:.|...:|  ::.:
 Frog   157 LLSGRKPMLYSFQTSLPRLPVPPVKDTVKRYLDSVKPLMDKEKFERMEGLAKDFANNLGPRLQWY 221

  Fly    93 AKLKSHDAENKHTSYISQPWFD-MYLADRAPLPLNYNP-----LLVMKSDARPEYQQQVVRATNL 151
            .||||..|    |:|:|..|.: :||..|.|:.:|.|.     |.|:.:..      |..||.|.
 Frog   222 LKLKSWWA----TNYVSDWWEEYIYLRGRGPIMVNSNYYAMDFLYVLPTHI------QAARAGNA 276

  Fly   152 IISSLRFWRSLQADLLEPEVYHMNAKKSDTSSYRRWMKVAPKAFATYASYAFKAFPLDMSQYNRL 216
            |.:.|.:.|.|..:.::| :..|.:                            ..||..:|:.|:
 Frog   277 IHAILLYRRKLDREEIKP-IQLMGS----------------------------TVPLCSAQWERM 312

  Fly   217 FGTSRIPRIGKDELVQSPDAKHILVMRRGHMYAVNVLDSSGYIESPSVILGRLRAVLKLDADREA 281
            :.|||||....|.:....|:|||:|..:|..:.| .|...|.:..|..|..:::.::...:..:.
 Frog   313 YNTSRIPGEETDTIQHVKDSKHIVVYHKGRYFKV-WLYHDGRLLKPREIEHQMQKIIDDTSSPQP 376

  Fly   282 ASVPLGVLTSGQRDEWAKTRQHFVSNTKNADLLEREVDAALFCVCLDGEEDGVFNENQQEPL--- 343
            ....|..||:|.|..|||.|:.:.:|.||...:: .|:.|.|.|.||..|.|.   |:::|:   
 Frog   377 GEEKLAALTAGDRVPWAKARKAYFANGKNKQSMD-AVEKAAFFVTLDETEQGY---NKEDPVNSL 437

  Fly   344 ---LKHLLAGKAQNRWFDKSISLLISADGTTAINFEHSWGDGVAVLRYFNELYKDTLKQPFVSTE 405
               .|.||.||..:|||||::|.::..:|...:|.||||.| ..::.:..|....|.|......|
 Frog   438 DSYAKSLLHGKCYDRWFDKTMSFVVFKNGKMGMNVEHSWAD-APIVGHLWEYVMATDKMELGYNE 501

  Fly   406 TVHTPAEGDFS-NVRP---INFEIDDATKSAVSEAYNKNASIVDNLDMNVLKYPHINKPTCKQYG 466
            ..|  .:||.: |:.|   :.::|.:..::.|.|:.....::.|::|.:...:....|...|:..
 Frog   502 DGH--CKGDVNGNIPPPSRLQWDIPEECQNVVEESLTVAKALADDVDFHSFPFDSFGKGLIKKSR 564

  Fly   467 LSPDSIIQLSFQLAYRQAYSGYVGSYESCSTSAFRHGRTETMRPCTNATRDFCEAILQPERSKPS 531
            .|||:.:|||.|||:.:....:..:||:..|..||.|||||:|.||..:.||..|:..|.::...
 Frog   565 TSPDAFVQLSLQLAHYRDKEKFCLTYEASMTRLFREGRTETVRSCTIESCDFVLAMSDPSQTNEK 629

  Fly   532 AGELRAMIDNCSKVHGQLTKEAAMGQGFDRHLFALRHTAQKEGIPIPDLYE--TEAYKRINNNII 594
            ..:|   ....::.|.|:.:.|..|.|.|||||.|...::..|:..|.|.|  :|.::      :
 Frog   630 RLQL---FKEAAEKHQQMYRLAMTGSGIDRHLFCLYVVSKYLGVDSPFLKEVLSEPWR------L 685

  Fly   595 STS-------------TLGSDALLAGSFGPVVKNGFGIGYSI--QNDFAGAIVTTYKN-QADGKV 643
            |||             ....:....|.||||..:|:|:.|.|  :|.....|.:.:.: :.|...
 Frog   686 STSQTPQQQVHLFQLEKFPENVSSGGGFGPVADDGYGVSYIIVGENLINFHISSKFSSPETDSHR 750

  Fly   644 FIDSLESAFDKICAV--IQQSSSSK 666
            |...::.|...|.|:  |..::|:|
 Frog   751 FGKHIKQAMIDILALFNISTNNSNK 775

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CPT2NP_647756.1 Carn_acyltransf 48..650 CDD:459926 173/637 (27%)
cpt1aXP_004913491.2 CPT_N 1..47 CDD:465132
Carn_acyltransf 175..757 CDD:459926 173/637 (27%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.