DRSC/TRiP Functional Genomics Resources

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Protein Alignment CPT2 and cpt1a

DIOPT Version :9

Sequence 1:NP_647756.1 Gene:CPT2 / 38355 FlyBaseID:FBgn0035383 Length:667 Species:Drosophila melanogaster
Sequence 2:XP_004913491.2 Gene:cpt1a / 100490391 -ID:- Length:778 Species:Xenopus tropicalis


Alignment Length:675 Identity:189/675 - (28%)
Similarity:317/675 - (46%) Gaps:95/675 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 LQCSKLPTLY-FQRSLPRLPIPLLENSCRRFLEATKPLLSPAEQAQTQQTVEQFRQGIG--MELH 92
            |...:.|.|| ||.||||||:|.::::.:|:|::.|||:...:..:.:...:.|...:|  ::.:
 Frog   157 LLSGRKPMLYSFQTSLPRLPVPPVKDTVKRYLDSVKPLMDKEKFERMEGLAKDFANNLGPRLQWY 221

  Fly    93 AKLKSHDAENKHTSYISQPWFD-MYLADRAPLPLNYNP-----LLVMKSDARPEYQQQVVRATNL 151
            .||||..|    |:|:|..|.: :||..|.|:.:|.|.     |.|:.:..      |..||.|.
 Frog   222 LKLKSWWA----TNYVSDWWEEYIYLRGRGPIMVNSNYYAMDFLYVLPTHI------QAARAGNA 276

  Fly   152 IISSLRFWRSLQADLLEPEVYHMNAKKSDTSSYRRWMKVAPKAFATYASYAFKAFPLDMSQYNRL 216
            |.:.|.:.|.|..:.::| :..|.:                            ..||..:|:.|:
 Frog   277 IHAILLYRRKLDREEIKP-IQLMGS----------------------------TVPLCSAQWERM 312

  Fly   217 FGTSRIPRIGKDELVQSPDAKHILVMRRGHMYAVNVLDSSGYIESPSVILGRLRAVLKLDADREA 281
            :.|||||....|.:....|:|||:|..:|..:.| .|...|.:..|..|..:::.::...:..:.
 Frog   313 YNTSRIPGEETDTIQHVKDSKHIVVYHKGRYFKV-WLYHDGRLLKPREIEHQMQKIIDDTSSPQP 376

  Fly   282 ASVPLGVLTSGQRDEWAKTRQHFVSNTKNADLLEREVDAALFCVCLDGEEDGVFNENQQEPL--- 343
            ....|..||:|.|..|||.|:.:.:|.||...:: .|:.|.|.|.||..|.|.   |:::|:   
 Frog   377 GEEKLAALTAGDRVPWAKARKAYFANGKNKQSMD-AVEKAAFFVTLDETEQGY---NKEDPVNSL 437

  Fly   344 ---LKHLLAGKAQNRWFDKSISLLISADGTTAINFEHSWGDGVAVLRYFNELYKDTLKQPFVSTE 405
               .|.||.||..:|||||::|.::..:|...:|.||||.| ..::.:..|....|.|......|
 Frog   438 DSYAKSLLHGKCYDRWFDKTMSFVVFKNGKMGMNVEHSWAD-APIVGHLWEYVMATDKMELGYNE 501

  Fly   406 TVHTPAEGDFS-NVRP---INFEIDDATKSAVSEAYNKNASIVDNLDMNVLKYPHINKPTCKQYG 466
            ..|  .:||.: |:.|   :.::|.:..::.|.|:.....::.|::|.:...:....|...|:..
 Frog   502 DGH--CKGDVNGNIPPPSRLQWDIPEECQNVVEESLTVAKALADDVDFHSFPFDSFGKGLIKKSR 564

  Fly   467 LSPDSIIQLSFQLAYRQAYSGYVGSYESCSTSAFRHGRTETMRPCTNATRDFCEAILQPERSKPS 531
            .|||:.:|||.|||:.:....:..:||:..|..||.|||||:|.||..:.||..|:..|.::...
 Frog   565 TSPDAFVQLSLQLAHYRDKEKFCLTYEASMTRLFREGRTETVRSCTIESCDFVLAMSDPSQTNEK 629

  Fly   532 AGELRAMIDNCSKVHGQLTKEAAMGQGFDRHLFALRHTAQKEGIPIPDLYE--TEAYKRINNNII 594
            ..:|   ....::.|.|:.:.|..|.|.|||||.|...::..|:..|.|.|  :|.::      :
 Frog   630 RLQL---FKEAAEKHQQMYRLAMTGSGIDRHLFCLYVVSKYLGVDSPFLKEVLSEPWR------L 685

  Fly   595 STS-------------TLGSDALLAGSFGPVVKNGFGIGYSI--QNDFAGAIVTTYKN-QADGKV 643
            |||             ....:....|.||||..:|:|:.|.|  :|.....|.:.:.: :.|...
 Frog   686 STSQTPQQQVHLFQLEKFPENVSSGGGFGPVADDGYGVSYIIVGENLINFHISSKFSSPETDSHR 750

  Fly   644 FIDSLESAFDKICAV--IQQSSSSK 666
            |...::.|...|.|:  |..::|:|
 Frog   751 FGKHIKQAMIDILALFNISTNNSNK 775

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CPT2NP_647756.1 Carn_acyltransf 45..655 CDD:279140 177/645 (27%)
cpt1aXP_004913491.2 CPT_N 1..47 CDD:406797
Carn_acyltransf 172..762 CDD:395612 177/645 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D559299at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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