DRSC/TRiP Functional Genomics Resources

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Protein Alignment CPT2 and cpt1al

DIOPT Version :10

Sequence 1:NP_647756.1 Gene:CPT2 / 38355 FlyBaseID:FBgn0035383 Length:667 Species:Drosophila melanogaster
Sequence 2:NP_001107300.1 Gene:cpt1al / 100135089 XenbaseID:XB-GENE-5770297 Length:767 Species:Xenopus tropicalis


Alignment Length:687 Identity:176/687 - (25%)
Similarity:303/687 - (44%) Gaps:104/687 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 HG----QHYQYLQCSKL------------PTLY-FQRSLPRLPIPLLENSCRRFLEATKPLLSPA 71
            ||    ||.:....:||            |.|| :|..|||||:|.::.:.:|:|::.:||::..
 Frog   133 HGWMYEQHGKMSATTKLWLALVKIFSGRNPMLYSYQAVLPRLPVPGVKETVQRYLDSVRPLMNDE 197

  Fly    72 EQAQTQQTVEQFRQGIG--MELHAKLKSHDAENKHTSYISQPWFD-MYLADRAPLPLNYNP---- 129
            |..:.....:.|...:.  ::.:.||||..|.|    |:|..|.: :||..|.|:.:|.|.    
 Frog   198 EYKRMTGLAKDFEVNLAPRLQWYLKLKSWWAAN----YVSDWWEEYIYLRGRGPIMVNSNYYAMD 258

  Fly   130 -LLVMKSDARPEYQQQVVRATNLIISSLRFWRSLQADLLEPEVYHMNAKKSDTSSYRRWMKVAPK 193
             |.|..:..      |..||.|.:.:.|.:.|.:..:.|:|.:..                    
 Frog   259 FLYVTPTPV------QAARAANTVHAILLYRRKVTREELKPLMIQ-------------------- 297

  Fly   194 AFATYASYAFKAFPLDMSQYNRLFGTSRIPRIGKDELVQSPDAKHILVMRRGHMYAVNVLDSSGY 258
                      ...|:..:||..:|.|:|||.:..|.:....|:|||:|..:|..:.|.|. ..|.
 Frog   298 ----------DCLPMCSAQYEHMFNTTRIPGVDTDTIQHYADSKHIVVYHKGRFFRVWVY-QGGR 351

  Fly   259 IESPSVILGRLRAVLKLDADREAASVPLGVLTSGQRDEWAKTRQHFVSNTKN---ADLLEREVDA 320
            :.:|..:..:.:.:|...:..:.....|..||:|:|..|||.|:.:..:.||   .||:||    
 Frog   352 LLNPKELELQFQNILNDPSPPQPGEEKLAALTAGERTAWAKARKTYFRSGKNLQALDLVER---- 412

  Fly   321 ALFCVCLDGEEDGVFNE---NQQEPLLKHLLAGKAQNRWFDKSISLLISADGTTAINFEHSWGDG 382
            |.|.|.|..:|:|:..|   |..:...|.||.||..:||||||.:.::..:|...:|.||||.|.
 Frog   413 AAFFVTLQDDEEGLRTEDPVNSLDAYGKSLLHGKCYDRWFDKSFTFIVFKNGKIGLNAEHSWADA 477

  Fly   383 VAVLRYFN-ELYKDTLKQPFVSTETVHTPAEGDFSNVRPINFEIDDATKSAVSEAYNKNASIVDN 446
            ..|...:. .|..|..:..:..........:.:....:.:.::|.:..:..:..:.....::.|:
 Frog   478 PIVGHMWEFVLATDCFQLGYNEEGNCKGQVDSNLPVPQRLQWDISEECQEVIQSSLAVAQALADD 542

  Fly   447 LDMNVLKYPHINKPTCKQYGLSPDSIIQLSFQLAYRQAYSGYVGSYESCSTSAFRHGRTETMRPC 511
            :|.:...:....|...|:...|||:.||::.|||:.:....:..:||:..|..||.|||||:|.|
 Frog   543 VDFHTFPFKEFGKGLIKKCRTSPDAFIQIALQLAHYRDKGKFCLTYEASMTRLFREGRTETVRSC 607

  Fly   512 TNATRDFCEAILQPERSKPSAGELRAMIDNCSKVHGQLTKEAAMGQGFDRHLFALRHTAQKEGIP 576
            |..:..|.:|::.|.::.....:|..:   .::.|..|.:.|..|.|.|||||.|...::..|:.
 Frog   608 TVESSQFVKAMMNPSQTNEERLKLFRL---AAEKHQMLYRHAMTGGGIDRHLFCLYVVSKYLGVD 669

  Fly   577 IPDLYE--TEAYKRINNNIISTSTLGSDAL-------------LAGSFGPVVKNGFGIGYSI--Q 624
            .|.|.|  :|.::      :|||......:             ..|.||||..:|:|:.|.|  :
 Frog   670 SPFLKEVLSEPWR------LSTSQTPIQQVELFDLVNHPEYVSCGGGFGPVADDGYGVSYIIVGE 728

  Fly   625 NDFAGAIVTTY-KNQADGKVFIDSLESAFDKICAVIQ 660
            |.....|.:.: .::.|...|...::.|...|.|:.:
 Frog   729 NLINFHISSKFSSHETDSHRFGKHIQGALRDILALFK 765

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CPT2NP_647756.1 Carn_acyltransf 48..650 CDD:459926 160/634 (25%)
cpt1alNP_001107300.1 CPT_N 1..47 CDD:465132
Carn_acyltransf 174..754 CDD:459926 160/633 (25%)
Blue background indicates that the domain is not in the aligned region.

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