DRSC/TRiP Functional Genomics Resources

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Protein Alignment CPT2 and cpt1al

DIOPT Version :9

Sequence 1:NP_647756.1 Gene:CPT2 / 38355 FlyBaseID:FBgn0035383 Length:667 Species:Drosophila melanogaster
Sequence 2:NP_001107300.1 Gene:cpt1al / 100135089 XenbaseID:XB-GENE-5770297 Length:767 Species:Xenopus tropicalis


Alignment Length:687 Identity:176/687 - (25%)
Similarity:303/687 - (44%) Gaps:104/687 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 HG----QHYQYLQCSKL------------PTLY-FQRSLPRLPIPLLENSCRRFLEATKPLLSPA 71
            ||    ||.:....:||            |.|| :|..|||||:|.::.:.:|:|::.:||::..
 Frog   133 HGWMYEQHGKMSATTKLWLALVKIFSGRNPMLYSYQAVLPRLPVPGVKETVQRYLDSVRPLMNDE 197

  Fly    72 EQAQTQQTVEQFRQGIG--MELHAKLKSHDAENKHTSYISQPWFD-MYLADRAPLPLNYNP---- 129
            |..:.....:.|...:.  ::.:.||||..|.|    |:|..|.: :||..|.|:.:|.|.    
 Frog   198 EYKRMTGLAKDFEVNLAPRLQWYLKLKSWWAAN----YVSDWWEEYIYLRGRGPIMVNSNYYAMD 258

  Fly   130 -LLVMKSDARPEYQQQVVRATNLIISSLRFWRSLQADLLEPEVYHMNAKKSDTSSYRRWMKVAPK 193
             |.|..:..      |..||.|.:.:.|.:.|.:..:.|:|.:..                    
 Frog   259 FLYVTPTPV------QAARAANTVHAILLYRRKVTREELKPLMIQ-------------------- 297

  Fly   194 AFATYASYAFKAFPLDMSQYNRLFGTSRIPRIGKDELVQSPDAKHILVMRRGHMYAVNVLDSSGY 258
                      ...|:..:||..:|.|:|||.:..|.:....|:|||:|..:|..:.|.|. ..|.
 Frog   298 ----------DCLPMCSAQYEHMFNTTRIPGVDTDTIQHYADSKHIVVYHKGRFFRVWVY-QGGR 351

  Fly   259 IESPSVILGRLRAVLKLDADREAASVPLGVLTSGQRDEWAKTRQHFVSNTKN---ADLLEREVDA 320
            :.:|..:..:.:.:|...:..:.....|..||:|:|..|||.|:.:..:.||   .||:||    
 Frog   352 LLNPKELELQFQNILNDPSPPQPGEEKLAALTAGERTAWAKARKTYFRSGKNLQALDLVER---- 412

  Fly   321 ALFCVCLDGEEDGVFNE---NQQEPLLKHLLAGKAQNRWFDKSISLLISADGTTAINFEHSWGDG 382
            |.|.|.|..:|:|:..|   |..:...|.||.||..:||||||.:.::..:|...:|.||||.|.
 Frog   413 AAFFVTLQDDEEGLRTEDPVNSLDAYGKSLLHGKCYDRWFDKSFTFIVFKNGKIGLNAEHSWADA 477

  Fly   383 VAVLRYFN-ELYKDTLKQPFVSTETVHTPAEGDFSNVRPINFEIDDATKSAVSEAYNKNASIVDN 446
            ..|...:. .|..|..:..:..........:.:....:.:.::|.:..:..:..:.....::.|:
 Frog   478 PIVGHMWEFVLATDCFQLGYNEEGNCKGQVDSNLPVPQRLQWDISEECQEVIQSSLAVAQALADD 542

  Fly   447 LDMNVLKYPHINKPTCKQYGLSPDSIIQLSFQLAYRQAYSGYVGSYESCSTSAFRHGRTETMRPC 511
            :|.:...:....|...|:...|||:.||::.|||:.:....:..:||:..|..||.|||||:|.|
 Frog   543 VDFHTFPFKEFGKGLIKKCRTSPDAFIQIALQLAHYRDKGKFCLTYEASMTRLFREGRTETVRSC 607

  Fly   512 TNATRDFCEAILQPERSKPSAGELRAMIDNCSKVHGQLTKEAAMGQGFDRHLFALRHTAQKEGIP 576
            |..:..|.:|::.|.::.....:|..:   .::.|..|.:.|..|.|.|||||.|...::..|:.
 Frog   608 TVESSQFVKAMMNPSQTNEERLKLFRL---AAEKHQMLYRHAMTGGGIDRHLFCLYVVSKYLGVD 669

  Fly   577 IPDLYE--TEAYKRINNNIISTSTLGSDAL-------------LAGSFGPVVKNGFGIGYSI--Q 624
            .|.|.|  :|.::      :|||......:             ..|.||||..:|:|:.|.|  :
 Frog   670 SPFLKEVLSEPWR------LSTSQTPIQQVELFDLVNHPEYVSCGGGFGPVADDGYGVSYIIVGE 728

  Fly   625 NDFAGAIVTTY-KNQADGKVFIDSLESAFDKICAVIQ 660
            |.....|.:.: .::.|...|...::.|...|.|:.:
 Frog   729 NLINFHISSKFSSHETDSHRFGKHIQGALRDILALFK 765

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CPT2NP_647756.1 Carn_acyltransf 45..655 CDD:279140 164/642 (26%)
cpt1alNP_001107300.1 CPT_N 1..46 CDD:293093
Carn_acyltransf 171..760 CDD:279140 164/642 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D559299at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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