DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or63a and Or1a

DIOPT Version :9

Sequence 1:NP_523895.2 Gene:Or63a / 38354 FlyBaseID:FBgn0035382 Length:420 Species:Drosophila melanogaster
Sequence 2:NP_525029.2 Gene:Or1a / 30978 FlyBaseID:FBgn0029521 Length:392 Species:Drosophila melanogaster


Alignment Length:408 Identity:80/408 - (19%)
Similarity:154/408 - (37%) Gaps:65/408 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 LDPSRCGQVLR--IWTIVLSVSSLASLYGHWQMLARYIHDIPRIGETAGTALQFLTSIAKMWYFL 95
            |.|.:.|.|||  :...::.:::...|......:.:..:.|....|.....||.::|:.||..||
  Fly    26 LQPDKKGNVLRSPLLYCIMCLTTSFELCTVCAFMVQNRNQIVLCSEALMHGLQMVSSLLKMAIFL 90

  Fly    96 FAHRQIYELLRKARCHELLQKCELFERMSDLPVIKEIRQQV--ESTMNRYWAS--TRRQILIYLY 156
                        |:.|:|:.            :|::|:...  |..:...|.|  .|.|::..:|
  Fly    91 ------------AKSHDLVD------------LIQQIQSPFTEEDLVGTEWRSQNQRGQLMAAIY 131

  Fly   157 SCICITT--NYFINSFVINLYRYFT----KPKGSYDIMLPLPSLYPAWEHKGLEFPYYHIQMYLE 215
            ..:|..|  ::.:....:.:.:|.:    .|..|:.::||.....|            |:  |..
  Fly   132 FMMCAGTSVSFLLMPVALTMLKYHSTGEFAPVSSFRVLLPYDVTQP------------HV--YAM 182

  Fly   216 TCSL--YICGMCAVSFDGVFIVL--CLHSVGLM-RSLNQMVEQATSELVPPDRRVEYLRCCIYQY 275
            .|.|  ::......|..||..:.  |...|.|. |.|.|.:::..| ...|.|....|.....::
  Fly   183 DCCLMVFVLSFFCCSTTGVDTLYGWCALGVSLQYRRLGQQLKRIPS-CFNPSRSDFGLSGIFVEH 246

  Fly   276 QRVANFATEVNNCFRHITFTQFLL--SLFNWGLALFQMSVGLGNNSSITMIRMTMYLVAAGYQIV 338
            .|:.......|..|..|.|.:.::  .|:...:..:.|.   ..|.:...:.....:|..  |:.
  Fly   247 ARLLKIVQHFNYSFMEIAFVEVVIICGLYCSVICQYIMP---HTNQNFAFLGFFSLVVTT--QLC 306

  Fly   339 VYCYNGQRFATASEEIANAFYQV-RWYGESREFRHLIRMMLMRTNRGFRLDVSWFMQMSLPTLMA 402
            :|.:..::....:|..:...|:| .|.....:.|.|....:.|..|...|. ::|.::..|.|:.
  Fly   307 IYLFGAEQVRLEAERFSRLLYEVIPWQNLPPKHRKLFLFPIERAQRETVLG-AYFFELGRPLLVW 370

  Fly   403 MVRTSGQYFLLLQNVNQK 420
            :.||:|.:..|:..:..|
  Fly   371 IFRTAGSFTTLMNALYAK 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or63aNP_523895.2 7tm_6 76..408 CDD:251636 69/349 (20%)
Or1aNP_525029.2 7tm_6 79..376 CDD:251636 66/341 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45465069
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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