DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Shab and KCNG4

DIOPT Version :9

Sequence 1:NP_001189037.1 Gene:Shab / 38352 FlyBaseID:FBgn0262593 Length:1607 Species:Drosophila melanogaster
Sequence 2:NP_758857.1 Gene:KCNG4 / 93107 HGNCID:19697 Length:519 Species:Homo sapiens


Alignment Length:481 Identity:173/481 - (35%)
Similarity:274/481 - (56%) Gaps:50/481 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   305 VNSRVSINVGGVRHEVLWRTLERLPHTRLGRLRECTTHEAIVELCDDYSLADNEYFFDRHPKSFS 369
            :...:.|||||.|:.:.|.||:|.|.:||.:||.|.::|.||:|||||.....|:||||.|.:|.
Human    57 LKKEILINVGGRRYLLPWSTLDRFPLSRLSKLRLCRSYEEIVQLCDDYDEDSQEFFFDRSPSAFG 121

  Fly   370 SILNFYRTGKLHIVDEMCVLAFSDDLEYWGVDELYLESCCQHKYHQRKENVHEEMRKEAES-LRQ 433
            .|::|...|||.::.|||.|:|.::|.|||::|.:||.||..|..::.|.:.|..:...|. |||
Human   122 VIVSFLAAGKLVLLQEMCALSFQEELAYWGIEEAHLERCCLRKLLRKLEELEELAKLHREDVLRQ 186

  Fly   434 RDEEEFGEGKCAEY---QKYLWELLEKPNTSFAARVIAVISILFIVLSTIALTLNTLPQLQHIDN 495
            :.|........:.:   ...|.|::|.|.:....:|.|.:||||:..:.::|.::|:|.|:    
Human   187 QRETRRPASHSSRWGLCMNRLREMVENPQSGLPGKVFACLSILFVATTAVSLCVSTMPDLR---- 247

  Fly   496 GTPQDNPQ-------LAMVEAVCITWFTLEYILRFSASPDKWKFFKGGLNIIDLLAILPYFVSLF 553
             ..:|..:       :.:||.:|:.||:||:.|||..:.||.:||:|.|||||:|||.||:|||.
Human   248 -AEEDQGECSRKCYYIFIVETICVAWFSLEFCLRFVQAQDKCQFFQGPLNIIDILAISPYYVSLA 311

  Fly   554 LLE------TNKNATDQFQDVRRVVQVFRIMRILRILKLARHSTGLQSLGFTLRNSYKELGLLML 612
            :.|      ...:.:...:.|..|::|.|.:|||.:::|||||.|||:||.|:|...:|.|||:|
Human   312 VSEEPPEDGERPSGSSYLEKVGLVLRVLRALRILYVMRLARHSLGLQTLGLTVRRCTREFGLLLL 376

  Fly   613 FLAMGVLIFSSLAYFAEKDE-KDTKFVSIPETFWWAGITMTTVGYGDIYPTTALGKVIGTVCCIC 676
            |||:.:.:||.|.|.|||:. :..:|.|||.::|||.|:||||||||:.|.:..|:::.....:.
Human   377 FLAVAITLFSPLVYVAEKESGRVLEFTSIPASYWWAIISMTTVGYGDMVPRSVPGQMVALSSILS 441

  Fly   677 GVLVIALPIPIIVNNFAEFYKNQMRREKALKRR-------------EALDRAKREGSIVSFHHIN 728
            |:|::|.|...|.:.|:..|....:.::.|:.|             |.||     ..:.|.|.: 
Human   442 GILIMAFPATSIFHTFSHSYLELKKEQEQLQARLRHLQNTGPASECELLD-----PHVASEHEL- 500

  Fly   729 LKDAFAKSMDLIDVIVDTGKQTNVVH 754
                   ..|:.|:|:: |....::|
Human   501 -------MNDVNDLILE-GPALPIMH 518

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShabNP_001189037.1 BTB 309..416 CDD:197585 51/106 (48%)
BTB_2 309..408 CDD:280393 48/98 (49%)
Ion_trans 501..700 CDD:278921 88/212 (42%)
Ion_trans_2 613..696 CDD:285168 34/83 (41%)
KCNG4NP_758857.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..25
BTB 61..161 CDD:197585 48/99 (48%)
BTB_2 61..160 CDD:280393 48/98 (49%)
Ion_trans 262..465 CDD:278921 88/202 (44%)
Ion_trans_2 377..459 CDD:285168 34/81 (42%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 418..423 4/4 (100%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2126
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11537
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X19
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.910

Return to query results.
Submit another query.