DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shab and RPL37B

DIOPT Version :10

Sequence 1:NP_001189037.1 Gene:Shab / 38352 FlyBaseID:FBgn0262593 Length:1607 Species:Drosophila melanogaster
Sequence 2:NP_010788.1 Gene:RPL37B / 852111 SGDID:S000002908 Length:88 Species:Saccharomyces cerevisiae


Alignment Length:71 Identity:19/71 - (26%)
Similarity:32/71 - (45%) Gaps:12/71 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   747 GKQTNVVHPKGKRQSTPNIGRQTLDVQ----SAPGHNLSQTDGNSTEGESTSGRNPATTGTGCYK 807
            ||:.|..|....|     .||::..||    |:.|:..::|..::.   :...:...|||||..:
Yeast     9 GKRHNKSHTLCNR-----CGRRSFHVQKKTCSSCGYPSAKTRSHNW---AAKAKRRHTTGTGRMR 65

  Fly   808 NYDHVA 813
            ...||:
Yeast    66 YLKHVS 71

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShabNP_001189037.1 BTB_POZ_Shab-like 306..414 CDD:349720
Ion_trans 464..700 CDD:459842
RPL37BNP_010788.1 PTZ00073 1..83 CDD:240257 19/71 (27%)
Blue background indicates that the domain is not in the aligned region.

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