DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shab and RPL37B

DIOPT Version :9

Sequence 1:NP_001189037.1 Gene:Shab / 38352 FlyBaseID:FBgn0262593 Length:1607 Species:Drosophila melanogaster
Sequence 2:NP_010788.1 Gene:RPL37B / 852111 SGDID:S000002908 Length:88 Species:Saccharomyces cerevisiae


Alignment Length:71 Identity:19/71 - (26%)
Similarity:32/71 - (45%) Gaps:12/71 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   747 GKQTNVVHPKGKRQSTPNIGRQTLDVQ----SAPGHNLSQTDGNSTEGESTSGRNPATTGTGCYK 807
            ||:.|..|....|     .||::..||    |:.|:..::|..::.   :...:...|||||..:
Yeast     9 GKRHNKSHTLCNR-----CGRRSFHVQKKTCSSCGYPSAKTRSHNW---AAKAKRRHTTGTGRMR 65

  Fly   808 NYDHVA 813
            ...||:
Yeast    66 YLKHVS 71

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShabNP_001189037.1 BTB 309..416 CDD:197585
BTB_2 309..408 CDD:280393
Ion_trans 501..700 CDD:278921
Ion_trans_2 613..696 CDD:285168
RPL37BNP_010788.1 PTZ00073 1..83 CDD:240257 19/71 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2126
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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