DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shab and RPL37A

DIOPT Version :10

Sequence 1:NP_001189037.1 Gene:Shab / 38352 FlyBaseID:FBgn0262593 Length:1607 Species:Drosophila melanogaster
Sequence 2:NP_013286.1 Gene:RPL37A / 850882 SGDID:S000004175 Length:88 Species:Saccharomyces cerevisiae


Alignment Length:90 Identity:25/90 - (27%)
Similarity:40/90 - (44%) Gaps:14/90 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   747 GKQTNVVHPKGKRQSTPNIGRQTLDVQ----SAPGHNLSQTDGNSTEGESTSGRNPATTGTGCYK 807
            ||:.|..|....|     .||::..||    |:.|:..::|...:. |.....|:  |||||..:
Yeast     9 GKRHNKSHTLCNR-----CGRRSFHVQKKTCSSCGYPAAKTRSYNW-GAKAKRRH--TTGTGRMR 65

  Fly   808 NYDHVANLRNSNLHNRRGSSSEQDA 832
            ...||:....:..  :.||:|:..|
Yeast    66 YLKHVSRRFKNGF--QTGSASKASA 88

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShabNP_001189037.1 BTB_POZ_Shab-like 306..414 CDD:349720
Ion_trans 464..700 CDD:459842
RPL37ANP_013286.1 PTZ00073 1..85 CDD:240257 23/85 (27%)
Blue background indicates that the domain is not in the aligned region.

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