DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shab and AT1G52300

DIOPT Version :10

Sequence 1:NP_001189037.1 Gene:Shab / 38352 FlyBaseID:FBgn0262593 Length:1607 Species:Drosophila melanogaster
Sequence 2:NP_175640.1 Gene:AT1G52300 / 841660 AraportID:AT1G52300 Length:95 Species:Arabidopsis thaliana


Alignment Length:91 Identity:28/91 - (30%)
Similarity:36/91 - (39%) Gaps:25/91 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly  1259 QSFDVQERGSRVSLNENSVPKHRKTRFQQSFTAMRPSGATGVLGSSVLGGMR-----PRARFEDT 1318
            :||.:|:  ||.|  ..:.|..||..:..|..|:|.. .||.      |.||     || ||:. 
plant    25 RSFHIQK--SRCS--ACAYPAARKRTYNWSVKAIRRK-TTGT------GRMRYLRNVPR-RFKT- 76

  Fly  1319 KLDDETGGRREGELAGGSGSPAASGS 1344
                   |.|||..|.......||.:
plant    77 -------GFREGTEAKPRNKGVASSA 95

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShabNP_001189037.1 BTB_POZ_Shab-like 306..414 CDD:349720
Ion_trans 464..700 CDD:459842
AT1G52300NP_175640.1 PTZ00073 1..89 CDD:240257 26/83 (31%)
Blue background indicates that the domain is not in the aligned region.

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