DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shab and AT3G16080

DIOPT Version :10

Sequence 1:NP_001189037.1 Gene:Shab / 38352 FlyBaseID:FBgn0262593 Length:1607 Species:Drosophila melanogaster
Sequence 2:NP_566535.1 Gene:AT3G16080 / 820853 AraportID:AT3G16080 Length:95 Species:Arabidopsis thaliana


Alignment Length:91 Identity:28/91 - (30%)
Similarity:37/91 - (40%) Gaps:25/91 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly  1259 QSFDVQERGSRVSLNENSVPKHRKTRFQQSFTAMRPSGATGVLGSSVLGGMR-----PRARFEDT 1318
            :||.:|:  ||.|  ..:.|..||..:..|..|:|.. .||.      |.||     || ||:. 
plant    25 RSFHIQK--SRCS--ACAYPAARKRTYNWSVKAIRRK-TTGT------GRMRYLRNVPR-RFKT- 76

  Fly  1319 KLDDETGGRREGELAGGSGSPAASGS 1344
                   |.|||..|......:||.:
plant    77 -------GFREGTEAKPRSKASASSA 95

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShabNP_001189037.1 BTB_POZ_Shab-like 306..414 CDD:349720
Ion_trans 464..700 CDD:459842
AT3G16080NP_566535.1 PTZ00073 1..91 CDD:240257 26/85 (31%)
Blue background indicates that the domain is not in the aligned region.

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