DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shab and si:ch73-334d15.4

DIOPT Version :10

Sequence 1:NP_001189037.1 Gene:Shab / 38352 FlyBaseID:FBgn0262593 Length:1607 Species:Drosophila melanogaster
Sequence 2:NP_001429287.1 Gene:si:ch73-334d15.4 / 796217 ZFINID:ZDB-GENE-091204-184 Length:430 Species:Danio rerio


Alignment Length:450 Identity:158/450 - (35%)
Similarity:234/450 - (52%) Gaps:69/450 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   302 SKAVNSRVSINVGGVRHEVLWRTLERLPHTRLGRLRECTTHEAIVELCDDYSLADNEYFFDRHPK 366
            |:..:.::.:|||||:||.|..||..||.:||..|  ..|.:           :.:|.||||||:
Zfish    12 SEGSSEKIVLNVGGVKHETLRTTLMSLPGSRLAEL--VNTEK-----------SPSELFFDRHPE 63

  Fly   367 SFSSILNFYRTGKLHIVDEMCVLAFSDDLEYWGVDELYLESCCQHKYHQRKENVH-------EEM 424
            .|:.:|.:||:||||....:|.|...::..:||:....:|.||...:.|.||.:.       ..|
Zfish    64 VFAHVLQYYRSGKLHCPSNLCGLLLEEEFTFWGISSADVEPCCWETFQQNKETLKALAGIKPSVM 128

  Fly   425 RKEAESLRQRDEEEFGEGKCAEYQKYLWELLEKPNTSFAARVIAVISILFIVLSTIALTLNTLPQ 489
            :||.|| .|:.:.....|    :|:.:|.|.:||.:|..||:||:||:.||:||.||.:|.|||.
Zfish   129 KKEEES-GQKQQSSSSRG----WQRKIWALFDKPYSSVCARIIAIISLFFILLSIIAFSLWTLPS 188

  Fly   490 LQH-------IDNGT-------PQDNPQLAMVEAVCITWFTLEYILRFSASPDKWKFFKGGLNII 540
            :..       ..|.|       |.:...|..||.||..||..|:.:|..:.|.|..||...:||:
Zfish   189 INSHQFLNAWASNSTDDFSRTRPPEAQALDAVEIVCSIWFVFEFAIRAGSCPSKLWFFINVMNIV 253

  Fly   541 DLLAILPYF-------VSLFLLETNKNATDQFQDVRRVVQVFRIMRILRILKLARHSTGLQSLGF 598
            ||||:.|:|       .|:|.|              ..:...|.:|:||:.||.:|..|::.|..
Zfish   254 DLLALFPWFFRWSSNNFSVFAL--------------GFLHAMRCIRLLRVFKLMQHVFGVRVLTH 304

  Fly   599 TLRNSYKELGLLMLFLAMGVLIFSSLAYFAEKDEKDTKFVSIP--ETFWWAGITMTTVGYGDIYP 661
            |||.|...|.::.|.|::..|||.::.||||...||:...|..  :.||||.:|:|||||||:.|
Zfish   305 TLRASLTSLCIVPLLLSICTLIFGTMFYFAELTHKDSYISSSSGLDGFWWALVTLTTVGYGDMLP 369

  Fly   662 TTALGKVIGTVCCICGVLVIALPIPIIVNNFAEFYKNQMRREKALKRREALDRAKREGSI 721
            .|..||.:..:|.:.|||:|.||:|||||||.:|       ...:|.:.::.|...:.|:
Zfish   370 VTRQGKCVAFLCAMVGVLLIVLPVPIIVNNFLKF-------SSLVKTKHSMPRMNEKRSV 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShabNP_001189037.1 BTB_POZ_Shab-like 306..414 CDD:349720 38/107 (36%)
Ion_trans 464..700 CDD:459842 100/258 (39%)
si:ch73-334d15.4NP_001429287.1 None

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