DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Shab and RPL37

DIOPT Version :10

Sequence 1:NP_001189037.1 Gene:Shab / 38352 FlyBaseID:FBgn0262593 Length:1607 Species:Drosophila melanogaster
Sequence 2:NP_000988.1 Gene:RPL37 / 6167 HGNCID:10347 Length:97 Species:Homo sapiens


Alignment Length:62 Identity:16/62 - (25%)
Similarity:24/62 - (38%) Gaps:12/62 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly  1222 GGPRAQVKK-SASGDTALRNLAAGGVGAGGLSPLNDVYQSFDVQERGSRVSLNENSVPKHRK 1282
            |.|..:.:| :.|.....||.    .|.|.:..|..||:.|       |....|.:.||.::
Human    38 GYPAKRKRKYNWSAKAKRRNT----TGTGRMRHLKIVYRRF-------RHGFREGTTPKPKR 88

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShabNP_001189037.1 BTB_POZ_Shab-like 306..414 CDD:349720
Ion_trans 464..700 CDD:459842
RPL37NP_000988.1 PTZ00073 1..88 CDD:240257 16/60 (27%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.