DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shab and kcnk3b

DIOPT Version :10

Sequence 1:NP_001189037.1 Gene:Shab / 38352 FlyBaseID:FBgn0262593 Length:1607 Species:Drosophila melanogaster
Sequence 2:XP_700001.2 Gene:kcnk3b / 571330 ZFINID:ZDB-GENE-120709-43 Length:383 Species:Danio rerio


Alignment Length:428 Identity:87/428 - (20%)
Similarity:139/428 - (32%) Gaps:158/428 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   504 LAMVEAVCITWFTLEYIL----RFSASPDKW-KFFKGGLNIIDLLAILPYFVSLFLLETNKNATD 563
            ||::  :|    ||.|:|    .|.|...|. |..||.|:           ...|||....|.|.
Zfish     9 LALI--IC----TLSYLLIGAGVFDALESKQEKSQKGRLD-----------YRKFLLMHKYNLTR 56

  Fly   564 -QFQDVRRVVQVFRIMRILRILKLARHSTGLQ---------------SLGF-----------TLR 601
             .|..:.:||           |.|..|..|:|               ::|:           ...
Zfish    57 LDFDQIEKVV-----------LLLKPHKAGVQWKFSGSFYFAITVITTIGYGHAAPSTDAGKAFC 110

  Fly   602 NSYKELGL---LMLFLAMGVLIFSSLAYFAEKDEK---------------DTKFVSIPET----- 643
            ..|..||:   |::|.::|..|.:.:.:...|.:|               ...|.|...|     
Zfish   111 MGYALLGIPLTLVMFQSLGERINTFVRFLLHKAKKCMGLRRPEVSMANMVIIGFFSCVSTLCIGA 175

  Fly   644 --------------FWWAGITMTTVGYGDIYPTTALGK-----------VIGTVCCICGVLVIAL 683
                          |::..||:||:|:||.   .||.|           ....|..:.|:.||..
Zfish   176 AAFSHYEGWTFFHAFYYCFITLTTIGFGDY---VALQKDNALQNDPHYVAFSFVYILMGLTVIGA 237

  Fly   684 PIPIIVNNFAEFYKNQMRREKALKRREALDRAKREGSIVSFHHINLKDAFAKSMDLIDVIVDTGK 748
            .:.::|..|........||:  .::|..|.:.|.:|.:       |:.|...|...:.       
Zfish   238 FLNLVVLRFMTMNTEDERRD--AEQRALLSKDKHQGPV-------LRRAEPPSPSAVG------- 286

  Fly   749 QTNVVHPKGKRQSTPNIGRQTLDVQSAPG--------------HNLSQTDGNSTEGESTSGRNPA 799
                   :.||:...::..:.|..|:...              .:||.||....:|:.:......
Zfish   287 -------RDKRRGLKSVYAEVLHFQTVCSCLWYRSREKLVILPQDLSFTDALMEQGDVSPHHFFE 344

  Fly   800 TTGTGCYKNYDHV-------ANLRNSN---LHNRRGSS 827
            ...|||..|....       |:|||.:   |.::|.||
Zfish   345 NGPTGCVCNPQRCSAISTVSADLRNISPFRLFSKRRSS 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShabNP_001189037.1 BTB_POZ_Shab-like 306..414 CDD:349720
Ion_trans 464..700 CDD:459842 57/275 (21%)
kcnk3bXP_700001.2 Ion_trans_2 <73..132 CDD:462301 9/58 (16%)
Ion_trans_2 167..243 CDD:462301 16/78 (21%)
Blue background indicates that the domain is not in the aligned region.

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