DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shab and kcnb2b

DIOPT Version :10

Sequence 1:NP_001189037.1 Gene:Shab / 38352 FlyBaseID:FBgn0262593 Length:1607 Species:Drosophila melanogaster
Sequence 2:XP_695259.4 Gene:kcnb2b / 566883 ZFINID:ZDB-GENE-091113-38 Length:831 Species:Danio rerio


Alignment Length:800 Identity:383/800 - (47%)
Similarity:503/800 - (62%) Gaps:125/800 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   267 GVPTHSQSNTTGALQRTHSRSMSSIPPPEPFMIAQSKAVNSRVSINVGGVRHEVLWRTLERLPHT 331
            |||            :...||:||: ||||..|.::||.:.||.|||||:.||||||||:|||.|
Zfish     8 GVP------------KPGGRSVSSL-PPEPIEIIRTKARSRRVRINVGGLNHEVLWRTLDRLPRT 59

  Fly   332 RLGRLRECTTHEAIVELCDDYSLADNEYFFDRHPKSFSSILNFYRTGKLHIVDEMCVLAFSDDLE 396
            |||:||:|.||::::|:||||.|.:|||||||||.:|:||||||||||||:::|||.|:|..:|:
Zfish    60 RLGKLRDCNTHDSLMEVCDDYCLNENEYFFDRHPGAFTSILNFYRTGKLHMMEEMCALSFGQELD 124

  Fly   397 YWGVDELYLESCCQHKYHQRKENVHEEMRKEAESLRQRD-EEEFGEGKCAEYQKYLWELLEKPNT 460
            |||:||:|||||||.:|||:||.::||:|:|||:||:|: |.||....|.|.:|.||||||||::
Zfish   125 YWGIDEIYLESCCQARYHQKKEQMNEELRREAETLREREGEGEFDNTCCPEKRKKLWELLEKPSS 189

  Fly   461 SFAARVIAVISILFIVLSTIALTLNTLPQLQHIDN-GTPQDNPQLAMVEAVCITWFTLEYILRFS 524
            |.||:::|:||||||||||:||:|||||:||..|. |...||||||.||||||.|||:||:|||.
Zfish   190 SVAAKILAIISILFIVLSTVALSLNTLPELQVTDEFGQANDNPQLAHVEAVCIAWFTMEYLLRFL 254

  Fly   525 ASPDKWKFFKGGLNIIDLLAILPYFVSLFLLETNKNATDQFQDVRRVVQVFRIMRILRILKLARH 589
            :||:|||||||.||:|||||||||:|::||.|:||:.. |||:||||||:|||||||||||||||
Zfish   255 SSPNKWKFFKGPLNVIDLLAILPYYVTIFLTESNKSVL-QFQNVRRVVQIFRIMRILRILKLARH 318

  Fly   590 STGLQSLGFTLRNSYKELGLLMLFLAMGVLIFSSLAYFAEKDEKDTKFVSIPETFWWAGITMTTV 654
            ||||||||||||.||.|||||:||||||::|||||.:||||||..|||.|||.:||||.||||||
Zfish   319 STGLQSLGFTLRRSYNELGLLILFLAMGIMIFSSLVFFAEKDEDATKFTSIPASFWWATITMTTV 383

  Fly   655 GYGDIYPTTALGKVIGTVCCICGVLVIALPIPIIVNNFAEFYKNQMRREKALKRREALDRAKREG 719
            |||||||.|.|||::|.:|||.||||||||||||||||:||||.|.|:|||:||||||:||||.|
Zfish   384 GYGDIYPQTLLGKIVGGLCCIAGVLVIALPIPIIVNNFSEFYKEQKRQEKAIKRREALERAKRNG 448

  Fly   720 SIVSFHHINLKDAFAKSMDLIDVIVDTGKQTNVVHPKGKRQSTPNIGRQTLDVQSAPGH-NLSQT 783
            ||||   :|||||||:||:|:||.|:....                 ::..|...:|.. .:.|.
Zfish   449 SIVS---MNLKDAFARSMELMDVTVEKSDD-----------------KRLTDNHLSPSRWGIPQR 493

  Fly   784 DGNSTEGESTSGRNPATTGTGCYKNYDHVANLRNSNLHNRRGSSSEQDAVPPYS-FDNPNARQTS 847
            ..:.|...|...:.| .:|:   :.|.|:.:.::.|..|.....::......:| ....|:.|.:
Zfish   494 TSSDTSLRSFDKKFP-NSGS---QEYVHMPSPQHLNAQNLEEMYNQMTKTQSFSDLSTSNSTQPA 554

  Fly   848 MMAMESYRREQQALLQQQQQQQQQMLQMQQIQQKAPNGNGGATGGGVANNLAMVAASSAATAVAT 912
            :::......|.:.:....:||.::                        ..:..|.:.|:..:.|:
Zfish   555 VVSKHEVELEMKEVPTAVKQQPKE------------------------RTITDVRSISSVDSFAS 595

  Fly   913 AT-------NASNASNTA--------------------PGSEGAEGGGDGDGGGV---DDDNLSQ 947
            .|       .|:..|:||                    |.....|     :..|:   |.|:|::
Zfish   596 CTAEFGQGEKATTPSHTAEQFQQRLPKVSPQLHLGQLTPSDLSPE-----ENSGIVNRDTDDLNE 655

  Fly   948 ----------------AKGLPIQMMITPGEVAELRRQVALENLQNQRMDN--LEQDVPVEFECC- 993
                            ||||.:..:.|| |.|.|   ........|.::|  ||.|.| |.||. 
Zfish   656 FVENIRSSIRGTNPIKAKGLKVNFIETP-EDAPL---TPPNTSSPQDINNSLLEDDSP-EGECSP 715

  Fly   994 FCTTKDFKEFTDAEGVISLP 1013
            .|:..:.......||::..|
Zfish   716 LCSDSETVGGNSMEGLVLSP 735

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShabNP_001189037.1 BTB_POZ_Shab-like 306..414 CDD:349720 73/107 (68%)
Ion_trans 464..700 CDD:459842 180/236 (76%)
kcnb2bXP_695259.4 BTB_POZ_KCNB2 19..145 CDD:349719 84/126 (67%)
Ion_trans 193..429 CDD:459842 180/236 (76%)
Kv2channel 480..706 CDD:397541 43/262 (16%)

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