DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shab and kcng3

DIOPT Version :9

Sequence 1:NP_001189037.1 Gene:Shab / 38352 FlyBaseID:FBgn0262593 Length:1607 Species:Drosophila melanogaster
Sequence 2:XP_021336001.1 Gene:kcng3 / 565643 ZFINID:ZDB-GENE-111111-9 Length:422 Species:Danio rerio


Alignment Length:416 Identity:161/416 - (38%)
Similarity:253/416 - (60%) Gaps:30/416 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   311 INVGGVRHEVLWRTLERLPHTRLGRLRECTTHEAIVELCDDYSLADNEYFFDRHPKSFSSILNFY 375
            :||||.::......::..|..|:.||..|::.:.::|:||||....||:|||||.::|..|:.:.
Zfish    10 LNVGGTKYAFTREVIKDFPLRRVSRLHSCSSEKEVLEVCDDYDRERNEFFFDRHSEAFVFIMLYV 74

  Fly   376 RTGKLHIVDEMCVLAFSDDLEYWGVDELYLESCCQHKYHQRKENVH-----EEMRKEAESLRQRD 435
            |:|||..|.:||.|:|.:::.|||::..:||.|||.:...|..:.:     ::|:.|.||   |.
Zfish    75 RSGKLRFVPQMCELSFYNEMIYWGLESSHLEFCCQRRLEDRMSDTYTYFSEDDMKAEVES---RG 136

  Fly   436 EEE----FGEGK-CAEYQKYLWELLEKPNTSFAARVIAVISILFIVLSTIALTLNTLPQLQHIDN 495
            |||    |...: .|.:.:.:....|:|.:|.||:::|.:|::|:::|.:.|..:|||......|
Zfish   137 EEEQVSRFAPDRGSARWLERMRRTFEEPASSIAAQILASVSVVFVIMSMVILCASTLPDWDTAKN 201

  Fly   496 GTPQDNPQLAMVEAVCITWFTLEYILRFSASPDKWKFFKGGLNIIDLLAILPYFVSLFLLE-TNK 559
            .|.:::   .::|||||.|||.|.|:||..|.||.:|.:..|||||||||.||:||:.:.. |.:
Zfish   202 NTVEEH---RIIEAVCIGWFTAECIVRFIVSRDKCEFVRRPLNIIDLLAITPYYVSVAMTALTGE 263

  Fly   560 NATDQFQDVRRVVQVFRIMRILRILKLARHSTGLQSLGFTLRNSYKELGLLMLFLAMGVLIFSSL 624
            |  .|.|.....::|.|:|||..::|||||..|||:||.|||..|:|:.:|::|:.:.:.|||:|
Zfish   264 N--PQLQRAGVTLRVLRMMRIFWLIKLARHFLGLQTLGLTLRRCYREMVMLLVFVCVAMAIFSAL 326

  Fly   625 AYFAEK----DEKDTKFVSIPETFWWAGITMTTVGYGDIYPTTALGKVIGTVCCICGVLVIALPI 685
            |...|.    :..:..:.|||.:.||..|:||||||||:||.|..|:|:|.||.:.|::::||||
Zfish   327 AQLLEHGLDLETSNEDYASIPASCWWVIISMTTVGYGDMYPITIPGRVLGGVCVVSGIVLLALPI 391

  Fly   686 PIIVNNFAEFYKNQMRREKALKRREA 711
            ..|.::|.:.|..       ||.|.|
Zfish   392 TFIYHSFVQCYHE-------LKFRSA 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShabNP_001189037.1 BTB 309..416 CDD:197585 40/104 (38%)
BTB_2 309..408 CDD:280393 37/96 (39%)
Ion_trans 501..700 CDD:278921 91/203 (45%)
Ion_trans_2 613..696 CDD:285168 36/86 (42%)
kcng3XP_021336001.1 BTB 9..107 CDD:321966 37/96 (39%)
Ion_trans 170..406 CDD:306908 102/247 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D818306at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11537
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X19
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
55.020

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