| Sequence 1: | NP_001189037.1 | Gene: | Shab / 38352 | FlyBaseID: | FBgn0262593 | Length: | 1607 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_064315.1 | Gene: | Kcnd3 / 56543 | MGIID: | 1928743 | Length: | 655 | Species: | Mus musculus |
| Alignment Length: | 681 | Identity: | 201/681 - (29%) |
|---|---|---|---|
| Similarity: | 315/681 - (46%) | Gaps: | 115/681 - (16%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 294 PEPFMIA-QSKAVNSRVSINVGGVRHEVLWR-TLERLPHTRLGRLRECTTHEAIVELCDDYSLAD 356
Fly 357 NEYFFDRHPKSFSSILNFYRTGKLHIVDEMCVLAFSDDLEYWGVDELYLESCCQHKYHQRKENVH 421
Fly 422 EEMRKEAESLRQRDEEEFGEGK--CAEYQKYLWELLEKPNTSFAARVIAVISILFIVLSTIALTL 484
Fly 485 NTLPQLQHIDNGTPQDNPQLA----------MVEAVCITWFTLEYILRFSASPDKWKFFKGGLNI 539
Fly 540 IDLLAILPYFVSLFLLETNKNATDQFQDVRRVVQVFRIMRILRILKLARHSTGLQSLGFTLRNSY 604
Fly 605 KELGLLMLFLAMGVLIFSSLAYFAEKDEKDTKFVSIPETFWWAGITMTTVGYGDIYPTTALGKVI 669
Fly 670 GTVCCICGVLVIALPIPIIVNNFAEFYKNQMRREK---ALKRREALDRAKREGSIVSFHHINLKD 731
Fly 732 AFAKSMDLIDVIVD--TGKQTNVVHPK-----------------------GKRQSTPNIGRQTLD 771
Fly 772 VQSAPGHNLSQTDGN--STEGESTSGRNPATTGTGCYKNYDHVANLRNSNLHNRRGSSSEQDAVP 834
Fly 835 PYSFDNPNARQTSMMAMESYRREQQALLQQQQQQQQQMLQMQQIQQKAPNGNGGATGGGVANNLA 899
Fly 900 MVAASSAATAVAT--ATNASNASNTAPGSEG 928 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Shab | NP_001189037.1 | BTB | 309..416 | CDD:197585 | 41/107 (38%) |
| BTB_2 | 309..408 | CDD:280393 | 38/99 (38%) | ||
| Ion_trans | 501..700 | CDD:278921 | 83/208 (40%) | ||
| Ion_trans_2 | 613..696 | CDD:285168 | 41/82 (50%) | ||
| Kcnd3 | NP_064315.1 | Interaction with KCNIP2. /evidence=ECO:0000250 | 2..20 | ||
| BTB_POZ_KCND3 | 6..143 | CDD:349726 | 48/134 (36%) | ||
| Ion_trans | 182..412 | CDD:366146 | 93/243 (38%) | ||
| Selectivity filter. /evidence=ECO:0000250 | 367..372 | 3/4 (75%) | |||
| DUF3399 | 442..563 | CDD:371777 | 24/142 (17%) | ||
| Mediates dendritic targeting. /evidence=ECO:0000250 | 472..487 | 0/14 (0%) | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 523..565 | 15/62 (24%) | |||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 615..655 | 6/23 (26%) | |||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_COG2126 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 1 | 1.000 | - | - | X19 | |
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 3 | 2.810 | |||||