DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shab and kcnk3a

DIOPT Version :10

Sequence 1:NP_001189037.1 Gene:Shab / 38352 FlyBaseID:FBgn0262593 Length:1607 Species:Drosophila melanogaster
Sequence 2:NP_001025333.1 Gene:kcnk3a / 561866 ZFINID:ZDB-GENE-040724-171 Length:390 Species:Danio rerio


Alignment Length:434 Identity:78/434 - (17%)
Similarity:143/434 - (32%) Gaps:100/434 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   465 RVIAVISILFIVLSTIALTLNTLPQLQHIDNGTPQDNPQLAMVEAVCITWFTLEYILR--FSASP 527
            |.:.:|...|..|...|...:.|.....|......|:.:..:::...::....:.:.|  ....|
Zfish     7 RTLVLIICTFTYLLVGAAVFDALESKMEITQKKILDDRKRELMDKYNLSKVNFDELERVVLQLKP 71

  Fly   528 DK----WKFFKGGLNIIDLLAILPY------------FVSLFLLETNKNATDQFQDVRRVVQVFR 576
            .|    |:|.......|.::..:.|            |...:.|.........||.:...:..| 
Zfish    72 HKAGVQWRFAGSFYFAITVITTIGYGHAAPSTDGGKVFCMFYALLGIPLTLVMFQSLGERINTF- 135

  Fly   577 IMRILRILKLARHSTGLQSLGFTLRNSYKELGLL--MLFLAMGVLIFSSLAYFAEKDEKDTKFVS 639
               :..:|...:...||:....::.|... :||:  |..|.:|...||..        :|..|. 
Zfish   136 ---VKYLLHRLKKCLGLRHTEVSMANMVC-IGLISCMSTLCVGAAAFSRY--------EDWSFF- 187

  Fly   640 IPETFWWAGITMTTVGYGDIYPTTALGK-----------VIGTVCCICGVLVIALPIPIIVNNFA 693
              ..:::..||:||:|:||.   .||.|           ....:..:.|:.||...:.::|..|.
Zfish   188 --HAYYYCFITLTTIGFGDY---VALQKDNALQTNPQYVAFSFMYILTGLTVIGAFLNLVVLRFM 247

  Fly   694 EFYKNQMRREKALKRREALDRAKREGSIVSFHHINLKDAFAKSMDLIDVIVDTGKQTNVVHPKGK 758
            .......||:  .::|..|.|.::.|...:.|.|:                |....:...|..|.
Zfish   248 TMNAEDERRD--AEQRTLLSRNRQSGGAGTNHCIS----------------DPPSSSTAGHGGGS 294

  Fly   759 RQSTPNIGRQTLDVQ----------------SAP---GHNLSQTDGNSTEGESTSGRNPATTGTG 804
            .:...|:..:.|..|                |.|   .|:||.:|......|::...:  :.|..
Zfish   295 GKGLCNVYAEVLHFQSMCSCLWYKSQEKMRYSIPMIISHDLSTSDTYMEHSETSDVLH--SNGCV 357

  Fly   805 CYKNYDHVANLRNSNLHNRRGSSSEQDAVPPYSFDNPNARQTSM 848
            |....:|.|           .||.....:.|..:...:.|::|:
Zfish   358 CSALQEHSA-----------ASSVYTGLLSPAHYQRLSKRRSSI 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShabNP_001189037.1 BTB_POZ_Shab-like 306..414 CDD:349720
Ion_trans 464..700 CDD:459842 48/265 (18%)
kcnk3aNP_001025333.1 Ion_trans_2 <73..132 CDD:462301 9/58 (16%)
Ion_trans_2 173..243 CDD:462301 18/83 (22%)
Blue background indicates that the domain is not in the aligned region.

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