DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Shab and kcng4a

DIOPT Version :9

Sequence 1:NP_001189037.1 Gene:Shab / 38352 FlyBaseID:FBgn0262593 Length:1607 Species:Drosophila melanogaster
Sequence 2:NP_001103499.1 Gene:kcng4a / 561003 ZFINID:ZDB-GENE-050419-11 Length:538 Species:Danio rerio


Alignment Length:435 Identity:168/435 - (38%)
Similarity:259/435 - (59%) Gaps:22/435 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   311 INVGGVRHEVLWRTLERLPHTRLGRLRECTTHEAIVELCDDYSLADNEYFFDRHPKSFSSILNFY 375
            |||||.|:...|.|||:.|.||||||:.|::.|.|..:||||..|.:|:||||.|.:|..||||.
Zfish    63 INVGGNRYTFPWSTLEQFPLTRLGRLKPCSSPEEIARVCDDYDEARHEFFFDRSPNAFRVILNFL 127

  Fly   376 RTGKLHIVDEMCVLAFSDDLEYWGVDELYLESCCQHKYHQRKENVHEEMRKEAESLRQRD---EE 437
            ..|||.::.|||.|:..::|.||||:..|:|.||:.|.:.|.|.|.|..|:| |..|||:   ..
Zfish   128 AAGKLRLLREMCALSLHEELNYWGVEMTYMERCCKRKMYTRLEEVAELERRE-EERRQRNLQLRP 191

  Fly   438 EFGEGKCAEYQKYLWELLEKPNTSFAARVIAVISILFIVLSTIALTLNTLPQLQHIDNG--TPQD 500
            ...|.:..::...|.:::|.|.:....:|.|..|:|.:.::.|:|.::|:|.|:..:|.  ..|.
Zfish   192 PIVETRYRKFMNQLRDMVENPQSGVPGKVFACFSVLMVAITVISLCISTMPDLREEENRGVCSQK 256

  Fly   501 NPQLAMVEAVCITWFTLEYILRFSASPDKWKFFKGGLNIIDLLAILPYFVSLFLLETNKNATDQ- 564
            ...:.::|.||:.||:||::|||..:..|.:|.:|.|||||.:|||||:|||.:.|...:..:: 
Zfish   257 CQHMFIIETVCVAWFSLEFLLRFVQARSKLQFLRGPLNIIDAMAILPYYVSLVVDEKPNDENERP 321

  Fly   565 ------FQDVRRVVQVFRIMRILRILKLARHSTGLQSLGFTLRNSYKELGLLMLFLAMGVLIFSS 623
                  ...:..|:::.|.:|||.:::|||||.|||:||.|:|.|.:|.|||:|||.:.|.:||.
Zfish   322 SGGKGYLDKLGLVLRILRALRILYVMRLARHSLGLQTLGLTVRRSTREFGLLLLFLCVAVTLFSP 386

  Fly   624 LAYFAEKDEKDTK-FVSIPETFWWAGITMTTVGYGDIYPTTALGKVIGTVCCICGVLVIALPIPI 687
            |.:.||.:....: |.|||.::|||.|:||||||||:.|.:..|:|:.....:.|:|::|.|...
Zfish   387 LVHLAESELTGVQDFSSIPASYWWAIISMTTVGYGDMVPRSIPGQVVALSSILSGILIMAFPATS 451

  Fly   688 IVNNFAEFYKNQMRREKALKRREALDRA--------KREGSIVSF 724
            |.:.|:..|:...:....|.:.|....|        :::|..|:|
Zfish   452 IFHMFSRSYQELKQEHDRLFKEECAAAAAATTGLEEEQDGGWVAF 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShabNP_001189037.1 BTB 309..416 CDD:197585 53/104 (51%)
BTB_2 309..408 CDD:280393 50/96 (52%)
Ion_trans 501..700 CDD:278921 84/206 (41%)
Ion_trans_2 613..696 CDD:285168 33/83 (40%)
kcng4aNP_001103499.1 BTB 63..169 CDD:197585 53/105 (50%)
BTB_2 63..160 CDD:280393 50/96 (52%)
Ion_trans 261..464 CDD:278921 84/202 (42%)
Ion_trans_2 376..458 CDD:285168 33/81 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2126
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11537
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X19
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.910

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