DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shab and kcnk6

DIOPT Version :10

Sequence 1:NP_001189037.1 Gene:Shab / 38352 FlyBaseID:FBgn0262593 Length:1607 Species:Drosophila melanogaster
Sequence 2:NP_001025245.2 Gene:kcnk6 / 504083 ZFINID:ZDB-GENE-050309-213 Length:315 Species:Danio rerio


Alignment Length:170 Identity:41/170 - (24%)
Similarity:62/170 - (36%) Gaps:50/170 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   601 RNSYKELGLLM---LFLAMGVLIFS------------------------------SLAYFAEKDE 632
            |:.:..:|.::   .:|.:|.|:||                              :|..|.|:..
Zfish     6 RSCFMLIGFILAYFTYLLLGALVFSAIERPIEESLKADLSSLKAEFLNLSCVNSTALETFLERVL 70

  Fly   633 KDTKF-VSIPE-----TFW-------WAGITMTTVGYGDIYPTTALGKVIGTVCCICGVLVIALP 684
            |..|: ||:.|     |.|       :|...:||||||...|.:..||....|..:.||....|.
Zfish    71 KANKYGVSVLENASLRTNWDLASSLFFANTMVTTVGYGHTTPLSDAGKAFSIVYALIGVPFTMLV 135

  Fly   685 IPIIVNNFAEFYKNQMRREKALKRREALDRAKREGSIVSF 724
            :...|...  .:....|...|.:||..|.  :|..|:|.|
Zfish   136 LTACVQRL--MHPLTYRPISACQRRAGLQ--QRSASVVHF 171

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShabNP_001189037.1 BTB_POZ_Shab-like 306..414 CDD:349720
Ion_trans 464..700 CDD:459842 32/144 (22%)
kcnk6NP_001025245.2 Ion_trans_2 <89..144 CDD:462301 16/56 (29%)
Ion_trans_2 178..254 CDD:462301
Blue background indicates that the domain is not in the aligned region.

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