DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shab and kcnk5b

DIOPT Version :10

Sequence 1:NP_001189037.1 Gene:Shab / 38352 FlyBaseID:FBgn0262593 Length:1607 Species:Drosophila melanogaster
Sequence 2:NP_956927.1 Gene:kcnk5b / 393606 ZFINID:ZDB-GENE-040426-1297 Length:448 Species:Danio rerio


Alignment Length:455 Identity:88/455 - (19%)
Similarity:136/455 - (29%) Gaps:199/455 - (43%)


- Green bases have known domain annotations that are detailed below.


  Fly   437 EEFGEG----KCAEYQKYLWELLEKPNTSFAARVIAVISI-----------LFIVLSTIALTLNT 486
            |..|:|    |.|::..:.||    ....|||.||..|..           ||.:|..:.     
Zfish    66 EATGQGVTVTKEAQFNNWNWE----NAVIFAATVITTIGYGNVAPKTTGGRLFCILYGLC----- 121

  Fly   487 LPQLQHIDNGTPQDNPQLAMVEAVCITWFTLEYILRFSASPDKWKFFKGGLNIIDLLAILPYFVS 551
                     |.|           :|:||  :..:..|..|..|                   .:|
Zfish   122 ---------GIP-----------LCLTW--ISELGTFFGSRTK-------------------RLS 145

  Fly   552 LFLLETNKNATDQFQDVRRVVQVFRIMRILRILKLARHSTGLQSLGFTLRNSYKELGLLMLFLAM 616
            ..||.:..|       ||:|..:..|:.:|              .||.:.         ::..|.
Zfish   146 QLLLHSGLN-------VRKVQFICTIVFLL--------------WGFLVH---------LIIPAF 180

  Fly   617 GVLIFSSLAYFAEKDEKDTKFVSIPETFWWAGITMTTVGYGDI---------YPTTALGKVIGTV 672
            ..:.|.:..|.              |..:::..|:||||:||.         |||  |.:....:
Zfish   181 VFMFFENWTYL--------------EGLYFSFTTLTTVGFGDYVAGVDPSVNYPT--LYRFFVQL 229

  Fly   673 CCICGVLVIAL----PIPIIVNNFAEFYKNQMRR------------------------------- 702
            ....|:..::|    .:.::|.......|.:|||                               
Zfish   230 WIYLGLAWLSLFFSWNVHMVVEAHKVLKKRRMRRHRLPTDDVPEKKEVKKTPKPPPRSGVIDIFE 294

  Fly   703 -------------------EKALKRR--EALDRAKR-----EGSIVSFHHI-NLKDAFAKSMDLI 740
                               ||..|::  |.|.|:|.     :|.::...|. .|:..|:.|.::.
Zfish   295 FMSEKVEDYSDVIRAIGADEKRRKKKQEEELARSKSCSDLLQGLVIPLDHSPRLQRRFSVSANMC 359

  Fly   741 DVIVDTG---------KQ-----TNVVH--PKGKRQSTPNIGRQTLDVQSA-PGHNLSQTDGNST 788
            ..|.|..         ||     |.|.|  .|..|:...|..|...|.:|: |....|.|..|||
Zfish   360 MAISDESVDGLNNNNCKQEDDTLTKVRHKDQKVNRERAENPARCAWDSRSSDPSIFQSSTVTNST 424

  Fly   789  788
            Zfish   425  424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShabNP_001189037.1 BTB_POZ_Shab-like 306..414 CDD:349720
Ion_trans 464..700 CDD:459842 45/259 (17%)
kcnk5bNP_956927.1 Ion_trans_2 71..137 CDD:462301 19/96 (20%)
Ion_trans_2 171..243 CDD:462301 18/96 (19%)
Blue background indicates that the domain is not in the aligned region.

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