DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shab and KCND3

DIOPT Version :10

Sequence 1:NP_001189037.1 Gene:Shab / 38352 FlyBaseID:FBgn0262593 Length:1607 Species:Drosophila melanogaster
Sequence 2:NP_004971.2 Gene:KCND3 / 3752 HGNCID:6239 Length:655 Species:Homo sapiens


Alignment Length:681 Identity:200/681 - (29%)
Similarity:315/681 - (46%) Gaps:115/681 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   294 PEPFMIA-QSKAVNSRVSINVGGVRHEVLWR-TLERLPHTRLGRLRECTTHEAIVELCDDYSLAD 356
            |.|...| ::|..:..:.:||.|.|.:. || ||||.|.|.||     :|.:...     ::...
Human    26 PMPLAPADKNKRQDELIVLNVSGRRFQT-WRTTLERYPDTLLG-----STEKEFF-----FNEDT 79

  Fly   357 NEYFFDRHPKSFSSILNFYRTGKLHIVDEMCVLAFSDDLEYWGVDELYLESCCQHKYHQRKENVH 421
            .||||||.|:.|..:||||||||||.....|:.|:.|:|.::|:....:..||..:|..||    
Human    80 KEYFFDRDPEVFRCVLNFYRTGKLHYPRYECISAYDDELAFYGILPEIIGDCCYEEYKDRK---- 140

  Fly   422 EEMRKEAESLRQRDEEEFGEGK--CAEYQKYLWELLEKPNTSFAARVIAVISILFIVLSTIALTL 484
               |:.||.|...::.|..:..  ...:::.:|...|.|:||..|.|...::..||.:|.|...:
Human   141 ---RENAERLMDDNDSENNQESMPSLSFRQTMWRAFENPHTSTLALVFYYVTGFFIAVSVITNVV 202

  Fly   485 NTLPQLQHIDNGTPQDNPQLA----------MVEAVCITWFTLEYILRFSASPDKWKFFKGGLNI 539
            .|:|      .||...:.:|.          .::..|:..||:||:||..|:|.:::|.:..::|
Human   203 ETVP------CGTVPGSKELPCGERYSVAFFCLDTACVMIFTVEYLLRLFAAPSRYRFIRSVMSI 261

  Fly   540 IDLLAILPYFVSLFLLETNKNATDQFQDVRRVVQVFRIMRILRILKLARHSTGLQSLGFTLRNSY 604
            ||::||:||::.|.:  ||.      :||.......|:.|:.||.|.:|||.||:.||:||::..
Human   262 IDVVAIMPYYIGLVM--TNN------EDVSGAFVTLRVFRVFRIFKFSRHSQGLRILGYTLKSCA 318

  Fly   605 KELGLLMLFLAMGVLIFSSLAYFAEKDEKDTKFVSIPETFWWAGITMTTVGYGDIYPTTALGKVI 669
            .|||.|:..|.|.::||:::.::|||....:||.|||.:||:..:||||:||||:.|.|..||:.
Human   319 SELGFLLFSLTMAIIIFATVMFYAEKGSSASKFTSIPASFWYTIVTMTTLGYGDMVPKTIAGKIF 383

  Fly   670 GTVCCICGVLVIALPIPIIVNNFAEFYKNQMRREK---ALKRREALDRAKREGSIVSFHHINLKD 731
            |::|.:.||||||||:|:||:||:..|....|.:|   ..|.|.|..|..:.||..::.|.....
Human   384 GSICSLSGVLVIALPVPVIVSNFSRIYHQNQRADKRRAQKKARLARIRVAKTGSSNAYLHSKRNG 448

  Fly   732 AFAKSMDLIDVIVD--TGKQTNVVHPK-----------------------GKRQSTPNIGRQTLD 771
            ...::::|.....:  .||.|:::..:                       ..|.||.. ..:.:|
Human   449 LLNEALELTGTPEEEHMGKTTSLIESQHHHLLHCLEKTTGLSYLVDDPLLSVRTSTIK-NHEFID 512

  Fly   772 VQSAPGHNLSQTDGN--STEGESTSGRNPATTGTGCYKNYDHVANLRNSNLHNRRGSSSEQDAVP 834
            .|....:.:..:..|  ||...|.|. :|..|.|.|.:......:|.||||              
Human   513 EQMFEQNCMESSMQNYPSTRSPSLSS-HPGLTTTCCSRRSKKTTHLPNSNL-------------- 562

  Fly   835 PYSFDNPNARQTSMMAMESYRREQQALLQQQQQQQQQMLQMQQIQQKAPNGNGGATGGGVANNLA 899
                  |..|..||       :|...:..|..:|.........:..||.:        |:..|..
Human   563 ------PATRLRSM-------QELSTIHIQGSEQPSLTTSRSSLNLKADD--------GLRPNCK 606

  Fly   900 MVAASSAATAVAT--ATNASNASNTAPGSEG 928
            ....::|..::.|  |......|...|.|.|
Human   607 TSQITTAIISIPTPPALTPEGESRPPPASPG 637

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShabNP_001189037.1 BTB_POZ_Shab-like 306..414 CDD:349720 40/108 (37%)
Ion_trans 464..700 CDD:459842 93/245 (38%)
KCND3NP_004971.2 BTB_POZ_KCND3 6..143 CDD:349726 48/134 (36%)
Interaction with KCNIP1 and KCNIP2. /evidence=ECO:0000269|PubMed:17187064, ECO:0000269|PubMed:34997220 6..21
Interaction with KCNIP1. /evidence=ECO:0000269|PubMed:17187064 70..78 0/12 (0%)
Ion_trans 186..412 CDD:459842 91/239 (38%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 367..372 3/4 (75%)
DUF3399 468..563 CDD:463381 20/116 (17%)
Interaction with KCNIP1 and KCNIP2. /evidence=ECO:0000269|PubMed:34997220 470..487 0/16 (0%)
Mediates dendritic targeting. /evidence=ECO:0000250|UniProtKB:Q63881 472..487 0/14 (0%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 525..565 15/60 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 615..655 6/23 (26%)
Blue background indicates that the domain is not in the aligned region.

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