DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Shab and KCNA7

DIOPT Version :9

Sequence 1:NP_001189037.1 Gene:Shab / 38352 FlyBaseID:FBgn0262593 Length:1607 Species:Drosophila melanogaster
Sequence 2:NP_114092.2 Gene:KCNA7 / 3743 HGNCID:6226 Length:456 Species:Homo sapiens


Alignment Length:458 Identity:167/458 - (36%)
Similarity:237/458 - (51%) Gaps:97/458 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   292 PPPEPFMIAQSKAVNSRVSINVGGVRHEVLWRTLERLPHT------RLGRLRECTTHEAIVELCD 350
            |||        .....|:.:||.|:|.|...|||.|.|.|      |.||.              
Human     6 PPP--------CGCCERLVLNVAGLRFETRARTLGRFPDTLLGDPARRGRF-------------- 48

  Fly   351 DYSLADNEYFFDRHPKSFSSILNFYRT-GKLHIVDEMCVLAFSDDLEYWGVDELYLESCCQHKYH 414
             |..|..|||||||..||.::|.:|:: |:|.....:.:..|.:::.::|:.             
Human    49 -YDDARREYFFDRHRPSFDAVLYYYQSGGRLRRPAHVPLDVFLEEVAFYGLG------------- 99

  Fly   415 QRKENVHEEMRKEAESLRQRDEEEFGEGKC----------AEYQKYLWELLEKPNTSFAARVIAV 469
                         |.:|.:..|:|    .|          ..:.:.||.|.|.|.:|.||||:||
Human   100 -------------AAALARLREDE----GCPVPPERPLPRRAFARQLWLLFEFPESSQAARVLAV 147

  Fly   470 ISILFIVLSTIALTLNTLPQLQHIDNGT---------------------PQDNPQLA------MV 507
            :|:|.|::|.:...|.|||..:...:||                     |.:.|:|.      :|
Human   148 VSVLVILVSIVVFCLETLPDFRDDRDGTGLAAAAAAGPFPAPLNGSSQMPGNPPRLPFNDPFFVV 212

  Fly   508 EAVCITWFTLEYILRFSASPDKWKFFKGGLNIIDLLAILPYFVSLFLLETNKNATDQFQDVRRVV 572
            |.:||.||:.|.::|....|.|..|||..:|:||.:|||||||:|......:....|......::
Human   213 ETLCICWFSFELLVRLLVCPSKAIFFKNVMNLIDFVAILPYFVALGTELARQRGVGQQAMSLAIL 277

  Fly   573 QVFRIMRILRILKLARHSTGLQSLGFTLRNSYKELGLLMLFLAMGVLIFSSLAYFAEKDEKDTKF 637
            :|.|::|:.||.||:|||.|||.||.|||.|.:|||||:.||.:||::|||..||||.|..|:.|
Human   278 RVIRLVRVFRIFKLSRHSKGLQILGQTLRASMRELGLLIFFLFIGVVLFSSAVYFAEVDRVDSHF 342

  Fly   638 VSIPETFWWAGITMTTVGYGDIYPTTALGKVIGTVCCICGVLVIALPIPIIVNNFAEFYKNQMRR 702
            .||||:||||.:|||||||||:.|.|..||::|::|.|.|||.|:||:|:||:||:.||..:...
Human   343 TSIPESFWWAVVTMTTVGYGDMAPVTVGGKIVGSLCAIAGVLTISLPVPVIVSNFSYFYHRETEG 407

  Fly   703 EKA 705
            |:|
Human   408 EEA 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShabNP_001189037.1 BTB 309..416 CDD:197585 31/113 (27%)
BTB_2 309..408 CDD:280393 31/105 (30%)
Ion_trans 501..700 CDD:278921 102/204 (50%)
Ion_trans_2 613..696 CDD:285168 49/82 (60%)
KCNA7NP_114092.2 BTB_2 15..105 CDD:280393 33/130 (25%)
BTB 15..98 CDD:197585 30/97 (31%)
Ion_trans 200..404 CDD:278921 102/203 (50%)
Ion_trans_2 319..398 CDD:285168 47/78 (60%)
Selectivity filter. /evidence=ECO:0000250 358..363 4/4 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2126
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D818306at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X19
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.820

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