Sequence 1: | NP_001189037.1 | Gene: | Shab / 38352 | FlyBaseID: | FBgn0262593 | Length: | 1607 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_788300.3 | Gene: | KCNQ / 36071 | FlyBaseID: | FBgn0033494 | Length: | 993 | Species: | Drosophila melanogaster |
Alignment Length: | 1056 | Identity: | 213/1056 - (20%) |
---|---|---|---|
Similarity: | 349/1056 - (33%) | Gaps: | 352/1056 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 448 QKYLWELLEKPNTSFAARVIAVISILFIVLSTIALTL-NTLPQLQHIDNGTPQDNPQ-LAMVEAV 510
Fly 511 CITWFTLEYILRFSASP---------DKWKFFKGGLNIIDLLAILPYFVSLFLLETNKNATDQFQ 566
Fly 567 DVRRVVQVF--------RIMRILRILKLARHSTGLQSLGFTLRNSYKELGLLMLFLAMGVLIFSS 623
Fly 624 LAYFAEKDEKDTKFVSIPETFWWAGITMTTVGYGDIYPTTALGKVIGTVCCICGVLVIALPIPII 688
Fly 689 VNNFAEFYKNQMRREKALKRRE-------------ALDR-------------------AKREGSI 721
Fly 722 VSFHHINLKDAFAKSMDLI----DVIVDT---GKQTNVVHPKGKRQSTPNIGRQTLDVQSAPGHN 779
Fly 780 LSQTDGNSTEGESTSGRNPATTGTGCYKNY-----DHVANLRNSNLHNRRGS---------SSEQ 830
Fly 831 D-------------------------AVP--------------PYSFDNPNARQTSMMAMESYRR 856
Fly 857 EQQALLQQQQQQQQQMLQMQQIQQKAPNGNGGATGGGVANNLAMVAASSAATAVATATNASNASN 921
Fly 922 TAPGSEGAEGGGDGDGGGVDDD----NLSQAKGLPIQMM---------------ITPGEVAELRR 967
Fly 968 QVA---LENLQNQRMDNLEQDVPVEFECCFCTTKDFKEFTDAEGVISLPTSDFHKPICLEMRLAA 1029
Fly 1030 AGRQAG-----------AY------GLLSPLPA-----PLPPLHGPL---------------LAL 1057
Fly 1058 PPPPPLPPTSCAAVLLPAISQSSS----TSSSYGTTTSTTIA--LPLDVSLRYGATICSSSNFN- 1115
Fly 1116 ---------HN--------------------------YNNNFNTTTVGGGGNGTLLFGGNYNGSN 1145
Fly 1146 NNNADLASVDSS----DTYASCQTHPFLSQGDLTADFNDEACALDIDMDNLYINPLEREQHQGIS 1206
Fly 1207 SSTGFIVGLPS--TNSSGGPRAQVKKSASG-------DTALRNLAAGGVGAGGLSPLNDVYQSFD 1262
Fly 1263 VQERGSR-VSLNENSV 1277 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Shab | NP_001189037.1 | BTB | 309..416 | CDD:197585 | |
BTB_2 | 309..408 | CDD:280393 | |||
Ion_trans | 501..700 | CDD:278921 | 64/216 (30%) | ||
Ion_trans_2 | 613..696 | CDD:285168 | 33/82 (40%) | ||
KCNQ | NP_788300.3 | Ion_trans | 100..305 | CDD:278921 | 65/226 (29%) |
Ion_trans_2 | 221..295 | CDD:285168 | 31/74 (42%) | ||
KCNQ_channel | <619..719 | CDD:281513 | 19/117 (16%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG2126 | |
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR11537 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.910 |