DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shab and Sh

DIOPT Version :10

Sequence 1:NP_001189037.1 Gene:Shab / 38352 FlyBaseID:FBgn0262593 Length:1607 Species:Drosophila melanogaster
Sequence 2:NP_728123.1 Gene:Sh / 32780 FlyBaseID:FBgn0003380 Length:655 Species:Drosophila melanogaster


Alignment Length:915 Identity:241/915 - (26%)
Similarity:365/915 - (39%) Gaps:327/915 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 QQQQHSKQQQQQQQQQQQQLQLKQHQQQQQDILYQQHNEAIAIARGLQAATPADIGDNQPYYDTS 116
            :.:||.|:||||||.|::||:.|:.|::..:...|...:.:                      ..
  Fly    12 EDRQHRKKQQQQQQHQKEQLEQKEEQKKIAERKLQLREQQL----------------------QR 54

  Fly   117 GNVDWERAMGAGGAGAYGGIGIGSLPAAGGAAYHLGPANPAGLVSRHLDYGDGGHLAGPSAGLPA 181
            .::|                |.||||       .|...:..|                       
  Fly    55 NSLD----------------GYGSLP-------KLSSQDEEG----------------------- 73

  Fly   182 GAVGSGAGAGAGAGASVTGSGSGAGTGTGTGAGSGSGSGAAGKEVRYAPFPVASPTHSIPTTSQQ 246
                                          |||.|.|.|               |.|..|     
  Fly    74 ------------------------------GAGHGFGGG---------------PQHFEP----- 88

  Fly   247 IVGSVGGVGVGGASSQSISGGVPTHSQSNTTGALQRTHSRSMSSIPPPEPFMIAQSKAVNSRVSI 311
                                                        ||....|.        .||.|
  Fly    89 --------------------------------------------IPHDHDFC--------ERVVI 101

  Fly   312 NVGGVRHEVLWRTLERLPHTRLG----RLRECTTHEAIVELCDDYSLADNEYFFDRHPKSFSSIL 372
            ||.|:|.|...|||.:.|.|.||    |||.             :....|||||||...||.:||
  Fly   102 NVSGLRFETQLRTLNQFPDTLLGDPARRLRY-------------FDPLRNEYFFDRSRPSFDAIL 153

  Fly   373 NFYRT-GKLHIVDEMCVLAFSDDLEYWGVDELYLESCCQHKYHQRKENVHEEMRKEAESLRQRDE 436
            .:|:: |:|.....:.:..||::::::.:.:..:     :|:.:.:..:.||.|...::      
  Fly   154 YYYQSGGRLRRPVNVPLDVFSEEIKFYELGDQAI-----NKFREDEGFIKEEERPLPDN------ 207

  Fly   437 EEFGEGKCAEYQKYLWELLEKPNTSFAARVIAVISILFIVLSTIALTLNTLPQLQH------IDN 495
                     |.|:.:|.|.|.|.:|.||||:|:||:..|:||.:...|.|||:.:|      ..|
  Fly   208 ---------EKQRKVWLLFEYPESSQAARVVAIISVFVILLSIVIFCLETLPEFKHYKVFNTTTN 263

  Fly   496 GT-------PQDNPQLAMVEAVCITWFTLEYILRFSASPDKWKFFKGGLNIIDLLAILPYFVSLF 553
            ||       |.......::|.:||.|||.|..:||.|.|:|..|.:..:|:||::||:|||::|.
  Fly   264 GTKIEEDEVPDITDPFFLIETLCIIWFTFELTVRFLACPNKLNFCRDVMNVIDIIAIIPYFITLA 328

  Fly   554 LLETNKNATDQF-------QDVR-------RVVQVFRIMRILRILKLARHSTGLQSLGFTLRNSY 604
            .:...:..|...       ||..       .:::|.|::|:.||.||:|||.|||.||.||:.|.
  Fly   329 TVVAEEEDTLNLPKAPVSPQDKSSNQAMSLAILRVIRLVRVFRIFKLSRHSKGLQILGRTLKASM 393

  Fly   605 KELGLLMLFLAMGVLIFSSLAYFAEKDEKDTKFVSIPETFWWAGITMTTVGYGDIYPTTALGKVI 669
            :|||||:.||.:||::|||..||||...:::.|.|||:.||||.:|||||||||:.|....||::
  Fly   394 RELGLLIFFLFIGVVLFSSAVYFAEAGSENSFFKSIPDAFWWAVVTMTTVGYGDMTPVGVWGKIV 458

  Fly   670 GTVCCICGVLVIALPIPIIVNNFAEFYKNQMRREKALKRREALDRAKREGSIVSFHHI------- 727
            |::|.|.|||.||||:|:||:||..||..:..:|:...:              :|:|:       
  Fly   459 GSLCAIAGVLTIALPVPVIVSNFNYFYHRETDQEEMQSQ--------------NFNHVTSCPYLP 509

  Fly   728 ----------NLKDAFAKSMDLIDVIVDTGKQTNVVHPKGKRQSTPNIGRQTLDVQSAPGHNLSQ 782
                      :|.::.:..|||.|.:..|...|. .|| |:....|.:|.|  ..|..|      
  Fly   510 GTLGQHMKKSSLSESSSDMMDLDDGVESTPGLTE-THP-GRSAVAPFLGAQ--QQQQQP------ 564

  Fly   783 TDGNSTEGESTSGRNPATTGTGCYKNYDHVANLRNSNLHNRRGSSSEQDAVPPYSFDNPNARQTS 847
                                         ||:..:.::..:.....:|            ..||.
  Fly   565 -----------------------------VASSLSMSIDKQLQHPLQQ------------LTQTQ 588

  Fly   848 MMAMESYRREQQALLQQQ----QQQQQQMLQMQQIQQKAPNGN-GGATGGGVANNLAMVAASSAA 907
            :     |:::||...|||    |||||...|:||.|....|.: ..||.|..::.|.|...::.|
  Fly   589 L-----YQQQQQQQQQQQNGFKQQQQQTQQQLQQQQSHTINASAAAATSGSGSSGLTMRHNNALA 648

  Fly   908 TAVAT 912
            .::.|
  Fly   649 VSIET 653

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShabNP_001189037.1 BTB_POZ_Shab-like 306..414 CDD:349720 35/112 (31%)
Ion_trans 464..700 CDD:459842 114/262 (44%)
ShNP_728123.1 BTB_POZ 97..223 CDD:453885 44/158 (28%)
Ion_trans 226..488 CDD:459842 114/261 (44%)

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