DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shab and RpL37-1

DIOPT Version :10

Sequence 1:NP_001189037.1 Gene:Shab / 38352 FlyBaseID:FBgn0262593 Length:1607 Species:Drosophila melanogaster
Sequence 2:NP_573005.1 Gene:RpL37-1 / 32446 FlyBaseID:FBgn0030616 Length:93 Species:Drosophila melanogaster


Alignment Length:65 Identity:16/65 - (24%)
Similarity:23/65 - (35%) Gaps:18/65 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   747 GKQTNVVHPKGKRQSTPNIGRQTLDVQSA-------PGHNLSQTDGNSTEGESTSGRNPATTGTG 804
            ||:.|..|...:|     .||.:..:|.:       |...|...:.      |...:...|||||
  Fly     9 GKRHNKTHTLCRR-----CGRSSYHIQKSTCAQCGYPAAKLRSYNW------SVKAKRRKTTGTG 62

  Fly   805  804
              Fly    63  62

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShabNP_001189037.1 BTB_POZ_Shab-like 306..414 CDD:349720
Ion_trans 464..700 CDD:459842
RpL37-1NP_573005.1 PTZ00073 1..91 CDD:240257 16/65 (25%)
Blue background indicates that the domain is not in the aligned region.

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