DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shab and Kcng2

DIOPT Version :10

Sequence 1:NP_001189037.1 Gene:Shab / 38352 FlyBaseID:FBgn0262593 Length:1607 Species:Drosophila melanogaster
Sequence 2:NP_001100842.1 Gene:Kcng2 / 307234 RGDID:1309521 Length:480 Species:Rattus norvegicus


Alignment Length:451 Identity:157/451 - (34%)
Similarity:253/451 - (56%) Gaps:25/451 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   291 IPPPEPFMIAQ----SKAVNSR-VSINVGGVRHEVLWRTLERLPHTRLGRLRECTTHEAIVELCD 350
            :|..||....:    .:...:| |.|||||.|..:.|..|.|.|..||.|||.|..|:.::.:||
  Rat    10 VPGAEPGSAVRGGRGGRGARARHVIINVGGCRVRLAWAALARCPLARLERLRACRGHDELLRVCD 74

  Fly   351 DYSLADNEYFFDRHPKSFSSILNFYRTGKLHIVDEMCVLAFSDDLEYWGVDELYLESCCQHKYHQ 415
            ||.::.:|:||||.|.:|.:|:...|.|||.::...|.|||.|:|.|||:||..||.||..:..:
  Rat    75 DYDVSRDEFFFDRSPCAFRAIVALLRAGKLRLLRGPCALAFRDELAYWGIDEARLERCCLRRLRR 139

  Fly   416 RKENVHE-EMRKEAESLRQRDEEEFGEGKCAEYQKYLWELLEKPNTSFAARVIAVISILFIVLST 479
            |:|...| .....|...:.......|.|:....::.|.:::|.|::..|.::.|.:|:.|:.::.
  Rat   140 REEEAAEARATPPARGPQTSPGRALGSGRLERGRRRLRDVVENPHSGLAGKLFAYVSVAFVAVTA 204

  Fly   480 IALTLNTLPQLQHIDN----GTPQDNPQLAMVEAVCITWFTLEYILRFSASPDKWKFFKGGLNII 540
            :.|.|:|:|.::..:.    .|...|  |.::|.||:.||:.|::||...:..|..|.:..|.||
  Rat   205 VGLCLSTMPDVRAEEERGECSTKCRN--LFVLETVCVAWFSFEFLLRSLQAESKCAFLRTPLAII 267

  Fly   541 DLLAILPYFVSLFL-LETNKNATDQFQDVRRVVQVFRIMRILRILKLARHSTGLQSLGFTLRNSY 604
            |:|||||::|||.. |......:...:....|:::.|.:|:|.:::|||||.||:|||.|:|...
  Rat   268 DILAILPFYVSLLAGLAAGPTGSKMLERAGLVLRLLRALRVLYVMRLARHSLGLRSLGLTVRRCA 332

  Fly   605 KELGLLMLFLAMGVLIFSSLAYFAEKD---EKDTKFVSIPETFWWAGITMTTVGYGDIYPTTALG 666
            :|.|||:|||.:.:.:|:.|.:.||::   .:|  |.|:|.::|||.|:||||||||:.|.:..|
  Rat   333 REFGLLLLFLCVAMALFAPLVHLAERELGAHRD--FSSVPASYWWAVISMTTVGYGDMVPRSLPG 395

  Fly   667 KVIGTVCCICGVLVIALPIPIIVNNFAEFY---KNQMRR----EKALKRREALDRAKREGS 720
            :|:.....:.|:|::|.|:..|.:.|:..|   |.|.:|    |..|:.....|.:.|..|
  Rat   396 QVVALSSILSGILLMAFPVTSIFHTFSRSYSELKEQQQRAASPEPVLREDSTRDDSTRSAS 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShabNP_001189037.1 BTB_POZ_Shab-like 306..414 CDD:349720 50/108 (46%)
Ion_trans 464..700 CDD:459842 87/246 (35%)
Kcng2NP_001100842.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..25 3/14 (21%)
BTB_POZ_Kv6_KCNG 33..127 CDD:349691 44/93 (47%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 144..167 3/22 (14%)
Ion_trans 190..429 CDD:459842 86/242 (36%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 382..387 4/4 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 429..480 8/28 (29%)

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