DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Shab and Kcna10

DIOPT Version :9

Sequence 1:NP_001189037.1 Gene:Shab / 38352 FlyBaseID:FBgn0262593 Length:1607 Species:Drosophila melanogaster
Sequence 2:NP_001074609.1 Gene:Kcna10 / 242151 MGIID:3037820 Length:511 Species:Mus musculus


Alignment Length:504 Identity:185/504 - (36%)
Similarity:265/504 - (52%) Gaps:73/504 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   260 SSQSISGGVPTHS-----QSNTTGALQRTHSRSMSSIP-----PPEPFMIAQSKAVNSRVSINVG 314
            ||:...|..|..:     ..||      .|..:.|.||     ||.|..:..::. |.||.||:.
Mouse    36 SSKGRPGSSPFSNWRVLISDNT------NHETAFSKIPGEYVDPPGPEPVVLNEG-NQRVIINIA 93

  Fly   315 GVRHEVLWRTLERLPHTRLGRLRECTTHEAIVELCDDYSLADNEYFFDRHPKSFSSILNFYRT-G 378
            |:|.|...|||.:.|.|.||      ..|..::..|...   |||||||:..||..||.:|:: |
Mouse    94 GLRFETQLRTLNQFPETLLG------DREKRMQFFDSMR---NEYFFDRNRPSFDGILYYYQSGG 149

  Fly   379 KLHIVDEMCVLAFSDDLEYWGVDELYLESCCQHKYHQRKENVHEEMRKEAESLRQRDEEEFGEGK 443
            |:.....:.:..|:|::.::   ||..|:..|.:       ..|...|:.|:|...:        
Mouse   150 KIRRPANVPIDVFADEISFY---ELGSEAMDQFR-------EDEGFIKDPETLLPTN-------- 196

  Fly   444 CAEYQKYLWELLEKPNTSFAARVIAVISILFIVLSTIALTLNTLPQLQHIDNGTPQDNPQL---- 504
              ::.:..|.|.|.|.:|.|||.:||:|:|.:|:|.....|.|||:.:.........:|.:    
Mouse   197 --DFHRQFWLLFEYPESSSAARGVAVVSVLVVVISITIFCLETLPEFREDRELKVVRDPSINTNK 259

  Fly   505 ------------AMVEAVCITWFTLEYILRFSASPDKWKFFKGGLNIIDLLAILPYFVSL---FL 554
                        .|||:.||.|||.|.:|||...|.|..|||..:||||:::|:|||.:|   .:
Mouse   260 TGLSQTMFTDPFFMVESTCIVWFTFELVLRFVVCPSKTDFFKNIMNIIDIISIIPYFATLITELV 324

  Fly   555 LETNKNATDQFQDVRRVVQVFRIMRILRILKLARHSTGLQSLGFTLRNSYKELGLLMLFLAMGVL 619
            .||..:|.....  ..::::.|::|:.||.||:|||.|||.||.||:.|.:|||||:.||.:||:
Mouse   325 QETEPSAQQNMS--LAILRIIRLVRVFRIFKLSRHSKGLQILGQTLKASMRELGLLIFFLFIGVI 387

  Fly   620 IFSSLAYFAEKDEKDTKFVSIPETFWWAGITMTTVGYGDIYPTTALGKVIGTVCCICGVLVIALP 684
            :|||..||||.||.::.|.|||:.||||.:|||||||||:.|||..||::||:|.|.|||.||||
Mouse   388 LFSSAVYFAEVDEPESHFSSIPDGFWWAVVTMTTVGYGDMCPTTPGGKIVGTLCAIAGVLTIALP 452

  Fly   685 IPIIVNNFAEFYKNQMRREKALKRREALDR-----AKREGSIVSFHHIN 728
            :|:||:||..||..:...|:.......||:     ..|.||..|.:..|
Mouse   453 VPVIVSNFNYFYHRETENEEKPNIPGELDKILNSMGSRMGSTESLNKTN 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShabNP_001189037.1 BTB 309..416 CDD:197585 35/107 (33%)
BTB_2 309..408 CDD:280393 34/99 (34%)
Ion_trans 501..700 CDD:278921 105/217 (48%)
Ion_trans_2 613..696 CDD:285168 51/82 (62%)
Kcna10NP_001074609.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 25..44 3/7 (43%)
BTB_2 88..179 CDD:280393 34/102 (33%)
BTB 88..171 CDD:197585 31/94 (33%)
Ion_trans 267..467 CDD:278921 104/201 (52%)
Ion_trans_2 382..458 CDD:285168 47/75 (63%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 421..426 4/4 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 489..511 5/13 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2126
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X19
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.810

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