DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shab and Kcng1

DIOPT Version :9

Sequence 1:NP_001189037.1 Gene:Shab / 38352 FlyBaseID:FBgn0262593 Length:1607 Species:Drosophila melanogaster
Sequence 2:NP_001074603.1 Gene:Kcng1 / 241794 MGIID:3616086 Length:514 Species:Mus musculus


Alignment Length:455 Identity:172/455 - (37%)
Similarity:280/455 - (61%) Gaps:31/455 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   279 ALQRTHSRSMSSIPPPEPFMIAQSKAVNSR---VSINVGGVRHEVLWRTLERLPHTRLGRLRECT 340
            |::....|....:.|.:.  :.||.::..|   :.|||||:::.:.|.||:..|.||||:|:.||
Mouse    34 AIKGVFYRRAQRLRPQDD--LHQSCSLGDRRRQIIINVGGIKYSLPWTTLDEFPLTRLGQLKACT 96

  Fly   341 THEAIVELCDDYSLADNEYFFDRHPKSFSSILNFYRTGKLHIVDEMCVLAFSDDLEYWGVDELYL 405
            ..:.|:.:||||.:..||:||||:|.:|.:||.|.|.|||.::.|||.|:|.::|.|||:.|.:|
Mouse    97 NFDDILSVCDDYDVTCNEFFFDRNPGAFGTILTFLRAGKLRLLREMCALSFQEELLYWGIAEDHL 161

  Fly   406 ESCCQHKYHQRKENVHEEMRKEAES--LRQRDEEEFG----EGKCAEYQKYLWELLEKPNTSFAA 464
            :.||:.:|.|:.|...|.|.:|.|.  |...|:|..|    ||:.:...:.|.:::|:|::....
Mouse   162 DGCCKRRYLQKIEEFAEMMEREEEEEPLDSEDQESEGPSASEGRLSRCMRRLRDMVERPHSGLPG 226

  Fly   465 RVIAVISILFIVLSTIALTLNTLPQLQHIDNGTPQDNPQLA-------MVEAVCITWFTLEYILR 522
            :|.|.:|:||:.::.:.|:::|||.|:.     .::..|.:       :||:||:.||:||::||
Mouse   227 KVFACLSVLFVTVTAVNLSVSTLPSLRE-----EEEQGQCSQMCHNVFIVESVCVGWFSLEFLLR 286

  Fly   523 FSASPDKWKFFKGGLNIIDLLAILPYFVSLFL----LETNKNAT-DQFQD-VRRVVQVFRIMRIL 581
            |..:|.|:.|.:..|.:|||:|||||:|:|.:    ....|.:| :.:.| |..|::|.|.:|||
Mouse   287 FIQAPSKFAFLRSPLTLIDLVAILPYYVTLLVDGAASSRRKPSTGNSYLDKVGLVLRVLRALRIL 351

  Fly   582 RILKLARHSTGLQSLGFTLRNSYKELGLLMLFLAMGVLIFSSLAYFAEKDEKDT-KFVSIPETFW 645
            .:::|||||.|||:||.|.|...:|.|||:|||.:.:.:|:.|.|..|.:..|: :|.|||..:|
Mouse   352 YVMRLARHSLGLQTLGLTARRCTREFGLLLLFLCVAIALFAPLLYVIENEMADSPEFTSIPACYW 416

  Fly   646 WAGITMTTVGYGDIYPTTALGKVIGTVCCICGVLVIALPIPIIVNNFAEFY-KNQMRREKALKRR 709
            ||.||||||||||:.|.:..|:|:.....:.|:|::|.|:..|.:.|:..| :.:..:|:.|.||
Mouse   417 WAVITMTTVGYGDMVPRSTPGQVVALSSILSGILLMAFPVTSIFHTFSRSYLELKQEQERVLIRR 481

  Fly   710  709
            Mouse   482  481

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShabNP_001189037.1 BTB 309..416 CDD:197585 50/106 (47%)
BTB_2 309..408 CDD:280393 47/98 (48%)
Ion_trans 501..700 CDD:278921 87/213 (41%)
Ion_trans_2 613..696 CDD:285168 33/83 (40%)
Kcng1NP_001074603.1 BTB_POZ_KCNG1_2 60..173 CDD:349728 52/112 (46%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 180..205 8/24 (33%)
Ion_trans 227..471 CDD:395416 97/248 (39%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 424..429 4/4 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2126
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11537
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X19
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.910

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