DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Shab and Kcnv2

DIOPT Version :9

Sequence 1:NP_001189037.1 Gene:Shab / 38352 FlyBaseID:FBgn0262593 Length:1607 Species:Drosophila melanogaster
Sequence 2:NP_899002.1 Gene:Kcnv2 / 240595 MGIID:2670981 Length:562 Species:Mus musculus


Alignment Length:548 Identity:192/548 - (35%)
Similarity:298/548 - (54%) Gaps:63/548 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   232 PVASP-THSIPTT-SQQIVGSVGGVGVGGASSQSISGGVPTHSQSNTTG---------------- 278
            |.::| |..:|.| |.|...|:..:|....|..||:   |..::.|...                
Mouse    16 PWSTPETEDVPNTGSNQHRRSICSLGARTGSQASIA---PQWTEGNYNYYIEEDEDCGEEGEDWK 77

  Fly   279 ---ALQRTHSRSMSSIPPPEPFMIAQSKAVNSRVSINVGGVRHEVLWRTLE--RLPHTRLGRLRE 338
               |.:...:..::|:........||.    |.:.:||||  |..|....|  ..|.||||||..
Mouse    78 DDLAEENQKAECLTSLLDGHNDTPAQM----STLKVNVGG--HSYLLECCELANYPKTRLGRLAT 136

  Fly   339 CTTHEAIVELCDDYSLADNEYFFDRHPKSFSSILNFYRTGKLHIVDEMCVLAFSDDLEYWGVDEL 403
            .||....:.|||||....:||||||.|..|..|.|||.:|.|.:.||:|..:|.::|.||||...
Mouse   137 STTRRGQLGLCDDYEAQTDEYFFDRDPAVFQLIYNFYTSGVLLVRDELCPRSFLEELGYWGVRLK 201

  Fly   404 YLESCCQHKYHQRKENVHEEMRKEAESLRQRDEEEFGEGKCAEYQKY------LWELLEKPNTSF 462
            |...||:..:.:|::.:.|:::.:.| ||.:.:.|..|....:.:.|      ||.|:|||.:|.
Mouse   202 YTPRCCRICFEERRDELSEQLKIQRE-LRAQAQAEEAEELFRDMRFYGPQRQRLWNLMEKPFSSV 265

  Fly   463 AARVIAVISILFIVLSTIALTLNTLPQLQH-IDNGTPQDNPQ--LAMVEAVCITWFTLEYILRFS 524
            ||:.:.|.:.||:::|.:||.|||:.::|| .:.||...:|:  |..||.:|:.:||||::||.:
Mouse   266 AAKAMGVATNLFVLISVVALALNTVEEMQHQAEQGTGGGDPRPILEHVEMLCVAFFTLEFLLRLA 330

  Fly   525 ASPDKWKFFKGGLNIIDLLAILPYFVSL----FLLETNKNATDQFQD-----------VRRVVQV 574
            ::|:..:|.:..||::||:||||:::.|    |..|..::..|..::           |.:|:::
Mouse   331 STPNLQRFARSALNLVDLVAILPFYLQLLLECFTSEDQRHNKDSPREHDLETVGRVGKVGQVLRI 395

  Fly   575 FRIMRILRILKLARHSTGLQSLGFTLRNSYKELGLLMLFLAMGVLIFSSLAYFAEKDEKDTKFVS 639
            .|:|||.||||||||||||::.|||||..|:::|.||||:.||:..||:..|..|.|...|.|.|
Mouse   396 MRLMRIFRILKLARHSTGLRAFGFTLRQCYQQVGCLMLFITMGIFSFSAAVYSVEHDVPGTNFTS 460

  Fly   640 IPETFWWAGITMTTVGYGDIYPTTALGKVIGTVCCICGVLVIALPIPIIVNNFAEFYKNQMRREK 704
            |...:|||.::::||||||:||.|.||::...:|...|:::..:||.|:.|.|:::|......|.
Mouse   461 ILHAWWWAAVSISTVGYGDMYPETHLGRLFAFLCIAFGIILNGMPISILYNKFSDYYSKLKAYEY 525

  Fly   705 ALKRREA-----LDRA-KREGSIVSFHH 726
            ...|||.     :.|| |:....:|..|
Mouse   526 TAIRRERGKVNFMQRATKKMAECLSESH 553

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShabNP_001189037.1 BTB 309..416 CDD:197585 47/108 (44%)
BTB_2 309..408 CDD:280393 45/100 (45%)
Ion_trans 501..700 CDD:278921 87/215 (40%)
Ion_trans_2 613..696 CDD:285168 33/82 (40%)
Kcnv2NP_899002.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..34 7/17 (41%)
BTB 107..198 CDD:197585 42/92 (46%)
BTB 107..198 CDD:295341 42/92 (46%)
Ion_trans 305..521 CDD:278921 87/215 (40%)
Ion_trans_2 434..509 CDD:285168 30/74 (41%)
Selectivity filter. /evidence=ECO:0000250 474..479 4/4 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2126
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D818306at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11537
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X19
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.920

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