DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shab and KCTD2

DIOPT Version :9

Sequence 1:NP_001189037.1 Gene:Shab / 38352 FlyBaseID:FBgn0262593 Length:1607 Species:Drosophila melanogaster
Sequence 2:NP_056168.1 Gene:KCTD2 / 23510 HGNCID:21294 Length:263 Species:Homo sapiens


Alignment Length:274 Identity:64/274 - (23%)
Similarity:93/274 - (33%) Gaps:62/274 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   210 GTGAGSGSGSGAAGKEVRYAPFP-VASPTHSIPTTSQQIVGSVGGVGVGGASSQSISGGVPTHSQ 273
            |.|.|.|||.|..|..||..|.| .|.||                                    
Human    12 GLGGGGGSGVGDGGGPVRGPPSPRPAGPT------------------------------------ 40

  Fly   274 SNTTGALQRTHSRSMSSI-----PPPEPFMIAQSKAVNSRVSINVGGVRHEVLWRTLERLPHTRL 333
                   .|.|.|..:::     |.|.|...|........|.:||||.......:||.|.|.:.|
Human    41 -------PRGHGRPAAAVAQPLEPGPGPPERAGGGGAARWVRLNVGGTYFVTTRQTLGREPKSFL 98

  Fly   334 GRLRECTTHEAIVELCDDYSLADNEYFFDRHPKSFSSILNFYRTGKLHIVDEMCVLAFSDDLEYW 398
            .||  |...:..::...|.:.|   |..||.|..|..|||:.|.|||.|..|:......::.|::
Human    99 CRL--CCQEDPELDSDKDETGA---YLIDRDPTYFGPILNYLRHGKLIITKELAEEGVLEEAEFY 158

  Fly   399 GVDELYLESCCQHKYHQRKENVHEEMRKEAESLRQRDEEEFGEGKCAEYQKYLWELLEKPNTSF- 462
            .:..|.  ...:.:....:....:...|....:.|..|||..:........:.:|.|....:|: 
Human   159 NIASLV--RLVKERIRDNENRTSQGPVKHVYRVLQCQEEELTQMVSTMSDGWKFEQLISIGSSYN 221

  Fly   463 -----AARVIAVIS 471
                 .|..:.|:|
Human   222 YGNEDQAEFLCVVS 235

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShabNP_001189037.1 BTB 309..416 CDD:197585 31/106 (29%)
BTB_2 309..408 CDD:280393 31/98 (32%)
Ion_trans 501..700 CDD:278921
Ion_trans_2 613..696 CDD:285168
KCTD2NP_056168.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..69 22/99 (22%)
BTB_POZ_KCTD2 72..177 CDD:349697 31/111 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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