DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Shab and twk-13

DIOPT Version :10

Sequence 1:NP_001189037.1 Gene:Shab / 38352 FlyBaseID:FBgn0262593 Length:1607 Species:Drosophila melanogaster
Sequence 2:NP_001122984.1 Gene:twk-13 / 192077 WormBaseID:WBGene00006668 Length:625 Species:Caenorhabditis elegans


Alignment Length:13 Identity:7/13 - (53%)
Similarity:8/13 - (61%) Gaps:0/13 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   287 LIRLFEVLGLATD 299
            |.||.:.||..||
 Worm    41 LFRLTKELGFKTD 53

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShabNP_001189037.1 BTB_POZ_Shab-like 306..414 CDD:349720
Ion_trans 464..700 CDD:459842
twk-13NP_001122984.1 Ion_trans_2 <214..269 CDD:462301
Ion_trans_2 401..478 CDD:462301
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.