DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shab and twk-7

DIOPT Version :10

Sequence 1:NP_001189037.1 Gene:Shab / 38352 FlyBaseID:FBgn0262593 Length:1607 Species:Drosophila melanogaster
Sequence 2:NP_498903.3 Gene:twk-7 / 192073 WormBaseID:WBGene00006662 Length:557 Species:Caenorhabditis elegans


Alignment Length:564 Identity:113/564 - (20%)
Similarity:179/564 - (31%) Gaps:223/564 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   316 VRHEVLWRTLERLPHTRLGR---------LREC--TTHEAIVELCDDYSLADNEYFFDRHPKSFS 369
            :|.|.|:.  |.:....|||         :..|  :.||.|.:..||.|..::|...:...:.|:
 Worm    97 LRREALFG--EEVTRAGLGRAEYYEDSHLIHSCDKSGHEDIDDESDDESKDEDEEEEETGIRKFA 159

  Fly   370 SI-------------------LNFYRTGKLH---IVDEMCVLAFSDDLEYWGVDELYLESCCQHK 412
            .:                   |.||...:.|   :.::...|.::...|:  ||:|.        
 Worm   160 KLVLPHVALVLLTCTYTVIGALIFYSVEQPHEQMMKEQQLKLIYTRQNEF--VDDLI-------- 214

  Fly   413 YHQRKENVHEEMRKEAESLRQRDEEEFGEGKCAEYQKYLWELLE-KPNTS-----------FAAR 465
               |....:|..|.|.|||.:|......:.....::||.....| |.|.:           ||..
 Worm   215 ---RLAAGNETKRYEWESLAERHMHNMSDQLFVAFEKYFLTSNEVKKNAATETWTFSSSIFFAVT 276

  Fly   466 VIAVIS---------------ILFIVLSTIALTLNTLPQL-----QHIDNGTPQDNPQLAMVEAV 510
            |:..|.               |||.:|. |.|||.|:..|     :|                  
 Worm   277 VVTTIGYGNPVPVTNIGRIWCILFSLLG-IPLTLVTIADLGKFLSEH------------------ 322

  Fly   511 CITWFTLEYILRFSASPDKWKFFKGGLNIIDLLAILPYFVSLFLLETNKNATDQFQDVRRVVQVF 575
             :.|....|:        |.|:.               .:|....|..::..:..          
 Worm   323 -LVWLYGNYL--------KLKYL---------------ILSRHRKERREHVCEHC---------- 353

  Fly   576 RIMRILRILKLARHSTGLQSLGFTLRNSYKE------LGLLMLFLAMGVLIFSSL---AYFAEKD 631
                         ||.|   :|..:....|.      |.:|:::.|.|.::.|.|   ::|.   
 Worm   354 -------------HSHG---MGHDMNIEEKRIPAFLVLAILIVYTAFGGVLMSKLEPWSFFT--- 399

  Fly   632 EKDTKFVSIPETFWWAGITMTTVGYGDIYPT-----------TALGKVIGTVCC-ICGVLVI--- 681
                       :|:|:.|||||||:||:.|.           ..||..|.|:|. :.||..|   
 Worm   400 -----------SFYWSFITMTTVGFGDLMPRRDGYMYIILLYIILGLAITTMCIDLVGVQYIRKI 453

  Fly   682 ------------ALPI----PIIVNNFAEFYKNQMRREKALKRREALDRAKREGSIVSFHHINLK 730
                        ||.:    .::|   :|.|.|.|::......|||.   ..|...||.|.|...
 Worm   454 HYFGRKIQDARSALAVVGGKVVLV---SELYANLMQKRARNMSREAF---IVENLYVSKHIIPFI 512

  Fly   731 DAFAKSMDLIDVIVDTGKQTNVVHPKGKRQSTPNIGRQTLDVQS 774
            ....:.:..||...|.              :|.:.....:|:||
 Worm   513 PTDIRCIRYIDQTADA--------------ATISTSSSAIDMQS 542

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShabNP_001189037.1 BTB_POZ_Shab-like 306..414 CDD:349720 25/130 (19%)
Ion_trans 464..700 CDD:459842 57/295 (19%)
twk-7NP_498903.3 Ion_trans_2 <265..321 CDD:462301 14/56 (25%)
Ion_trans_2 373..>422 CDD:462301 19/62 (31%)

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