DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shab and twk-1

DIOPT Version :10

Sequence 1:NP_001189037.1 Gene:Shab / 38352 FlyBaseID:FBgn0262593 Length:1607 Species:Drosophila melanogaster
Sequence 2:NP_001293466.1 Gene:twk-1 / 192072 WormBaseID:WBGene00006656 Length:451 Species:Caenorhabditis elegans


Alignment Length:306 Identity:69/306 - (22%)
Similarity:124/306 - (40%) Gaps:68/306 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   389 LAFSD-DLEYWGVDELYLESCCQHKYHQRKENVHEEMRKEAESLRQRD----EEEFGEGKCAEYQ 448
            :.|:| |.:..|.:|       :|......:.:.::.:|:..|...|.    .::|.:.||...:
 Worm     1 MTFNDGDNDRIGKEE-------EHAGLIENQIISQKTKKQLPSWLDRPYHVWRDQFQQDKCCPKK 58

  Fly   449 KYLWELLEKPNTSFAARVIAVISILFIVLSTIALTLNTLPQLQHIDNGTPQDNPQLAMVEAV--C 511
            ....||:      ||:        .::::..:||.|..|...|..|......|.:.:.::..  |
 Worm    59 MVKRELM------FAS--------TYVLILNVALILYVLFGCQVFDLRHSSTNNEASFLDRALFC 109

  Fly   512 ITWFTLEYILRFSASP--DKWKFFKGGLNIIDLLAILPYFVSLFLLETNKNATDQFQDVRRVVQV 574
            ||  |:..|...:.:|  |:.|.    :.|:..:|.:|    ||.:....|:.            
 Worm   110 IT--TISTIGYGNIAPFDDRGKV----ICILYCVAGIP----LFFMTVATNSV------------ 152

  Fly   575 FRIMRILRILKLARHSTGLQSLGFTLRNSYKELGLLMLFLAMGVLIFSSLAYFAEKDEKDTKFVS 639
             .::.|..|:..:..|..:::.||   ..|....||.....:|.||||...     |:.|  |: 
 Worm   153 -LVVDICNIVHRSYSSQNVENSGF---RWYTSAILLAAHCFIGALIFSLWI-----DQLD--FL- 205

  Fly   640 IPETFWWAGITMTTVGYGDIYPTT--ALGKVIGTVCCICGVLVIAL 683
              :.|:::.|::||:||||..||.  ....:|.||....||..:.|
 Worm   206 --DAFYFSFISITTIGYGDYSPTPEGLFQYIIVTVYLCTGVATMLL 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShabNP_001189037.1 BTB_POZ_Shab-like 306..414 CDD:349720 6/25 (24%)
Ion_trans 464..700 CDD:459842 53/226 (23%)
twk-1NP_001293466.1 Ion_trans_2 76..149 CDD:462301 20/82 (24%)
Ion_trans_2 182..256 CDD:462301 26/78 (33%)

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