DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shab and kqt-2

DIOPT Version :9

Sequence 1:NP_001189037.1 Gene:Shab / 38352 FlyBaseID:FBgn0262593 Length:1607 Species:Drosophila melanogaster
Sequence 2:NP_509392.3 Gene:kqt-2 / 181078 WormBaseID:WBGene00002234 Length:695 Species:Caenorhabditis elegans


Alignment Length:755 Identity:141/755 - (18%)
Similarity:247/755 - (32%) Gaps:250/755 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   418 ENVHEEMRKEAESLRQRDEEEFGEGKCAEYQKY---LWELLEKPNTSFAARVIAVISILFIVLST 479
            ::..:...:.::::|:|.....|..:....::.   ::..||||..  ||.......|..:|::.
 Worm    45 DDAEDSETEVSDNIRRRSTINLGNQRQRNLRRIRLKVYNFLEKPLN--AASAPYHFFIFGLVIAN 107

  Fly   480 IALTLNTLPQLQHIDNGTPQDNPQLA-----MVEAVCITWFTLEYILR-FSASPD-KWKFFKGGL 537
            |.|...|            .||....     .:|...|.:|.||:.:| :|...| |::...|.|
 Worm   108 IILGAAT------------NDNDSTVSKIHFFLEIFMIVFFILEFAVRLWSVRADAKYRTKYGRL 160

  Fly   538 -------NIIDLLAILPYFVSLFLLETNKNATDQFQDVRRVVQVFRIMRILRIL---KLARHSTG 592
                   .:||:| |:|..: |.|:....:......|..|.:|:.|:..:.|.:   ||.|.   
 Worm   161 YYLFHTVTLIDIL-IIPATI-LLLVFKGHDVDGSTLDTLRFIQILRLFHVDRQMATWKLLRK--- 220

  Fly   593 LQSLGFTLRNSYKELGLLMLFLAMGVLIFSSLAYFAE---------------KDEKDTKFVSIPE 642
                 ..:...::.:....:.|.:| |..:::.|..|               .:..:..|.::..
 Worm   221 -----MIILGKWQLMATYYITLVVG-LSLATIVYSTEALAQGIQDNGYGLIVPEGTNATFPTMAH 279

  Fly   643 TFWWAGITMTTVGYGDIYPTTALGKVIGTVCCICGVLV----------IALPIPIIVNNFAEFYK 697
            ::|:..:|:.|||||||||..||.|.:   .|:.|.:.          |::.:.:::.   |..|
 Worm   280 SWWFTAVTVMTVGYGDIYPVGALTKFL---VCVLGFIAFCTFQAANTQISVGLTLMME---EENK 338

  Fly   698 NQMR---REKALK------RREALDRAKREGSIVSFHHINLKDAFAKSMDLIDVIVDTGKQTNVV 753
            ||..   |..|..      |.......|.......|.|:..|         :.|..:...|..|:
 Worm   339 NQQTNRLRNLAASTIQCWWRYHLATNWKPPRRYTYFVHVCYK---------LYVTEERINQNRVL 394

  Fly   754 HPKGKRQSTPNIGRQTLDVQSAPGHNLSQTDGNSTEGE----STSG-RNPATTGTGCYKNYDHVA 813
            ..|         .|:.|: :..|....|.|..||...|    ...| ..|.......:...:...
 Worm   395 AKK---------LREKLE-KKRPIKKKSLTHQNSVTAEILKFGFKGMAKPMLEKQDSFDKAERKI 449

  Fly   814 NLRNSNLHNRRGSSSEQDAVPPYSFDNPNARQTSMMAMESYRREQQALLQQQQQQQQQMLQMQQI 878
            :||.:...:||.|..:..||.     :|..|:..:.|                            
 Worm   450 SLRRTRSEDRRSSLPDTLAVV-----DPAIRKRVLFA---------------------------- 481

  Fly   879 QQKAPNGNGGATGGGVANNLAMVAASSAATAVATATNASNASNTAPGSEGAEGGGDGDGGGVDDD 943
              :|.|                   ||..|:::::.:.|........:...|         .:.|
 Worm   482 --EARN-------------------SSVETSMSSSVDVSELETQFEITNFLE---------QNVD 516

  Fly   944 NLSQAKGLPIQMMI-------------------------TPGEVAELRRQVA-LENLQNQRMDNL 982
            .|| :|.:.|.::|                         ..|::..:..::| .||.:||:|..|
 Worm   517 ELS-SKEVDISLLIKYRPLLRFYYFVMFRFIMNKFHTQRIAGQLLMIEAEIAERENQRNQKMKEL 580

  Fly   983 EQDV----------PVE-----------FECCFCTTKDFKEFTDAEGVISLPTSDFHKPICLEMR 1026
            |..:          |.:           .|.|....:|.:..|||...|::.        ||.:.
 Worm   581 EAAILELTGKPTVSPFDDSGQKLSIIERLEFCEKRMEDLERKTDALNEITIK--------CLNLM 637

  Fly  1027 L----AAAGRQAGAYGLLSPLPAPLPPLHGPLLALPPPPP 1062
            :    .||.|.....|                  |||.||
 Worm   638 MMDTQEAASRTKDEQG------------------LPPKPP 659

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShabNP_001189037.1 BTB 309..416 CDD:197585
BTB_2 309..408 CDD:280393
Ion_trans 501..700 CDD:278921 53/240 (22%)
Ion_trans_2 613..696 CDD:285168 24/107 (22%)
kqt-2NP_509392.3 Ion_trans 96..318 CDD:366146 55/247 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2126
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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