DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shab and rpl-37.2

DIOPT Version :10

Sequence 1:NP_001189037.1 Gene:Shab / 38352 FlyBaseID:FBgn0262593 Length:1607 Species:Drosophila melanogaster
Sequence 2:NP_497727.1 Gene:rpl-37.2 / 175460 WormBaseID:WBGene00004451 Length:91 Species:Caenorhabditis elegans


Alignment Length:17 Identity:8/17 - (47%)
Similarity:8/17 - (47%) Gaps:0/17 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   202 YLYGGLPYLTCGGGVGG 218
            |..||..|...||..||
 Worm    64 YQGGGGRYQGGGGRQGG 80

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShabNP_001189037.1 BTB_POZ_Shab-like 306..414 CDD:349720
Ion_trans 464..700 CDD:459842
rpl-37.2NP_497727.1 PTZ00073 1..90 CDD:240257 8/17 (47%)
Blue background indicates that the domain is not in the aligned region.

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