DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shab and KCNG3

DIOPT Version :9

Sequence 1:NP_001189037.1 Gene:Shab / 38352 FlyBaseID:FBgn0262593 Length:1607 Species:Drosophila melanogaster
Sequence 2:NP_579875.1 Gene:KCNG3 / 170850 HGNCID:18306 Length:436 Species:Homo sapiens


Alignment Length:423 Identity:159/423 - (37%)
Similarity:249/423 - (58%) Gaps:29/423 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   309 VSINVGGVRHEVLWRTLERLPHTRLGRLRECTTHEAIVELCDDYSLADNEYFFDRHPKSFSSILN 373
            |.:||||.|:.:....|:..|..|:.||..|.:...::|:||||....||||||||.::|..||.
Human    11 VVLNVGGARYSLSRELLKDFPLRRVSRLHGCRSERDVLEVCDDYDRERNEYFFDRHSEAFGFILL 75

  Fly   374 FYR-TGKLHIVDEMCVLAFSDDLEYWGVDELYLESCCQHKYHQRKENVHEEMRKEAESLRQRDEE 437
            :.| .|||.....||.|:|.:::.|||::..:||.|||.:...|..:.:.....:...:..|||.
Human    76 YVRGHGKLRFAPRMCELSFYNEMIYWGLEGAHLEYCCQRRLDDRMSDTYTFYSADEPGVLGRDEA 140

  Fly   438 EFGEGKCAEYQKYLWEL---LEKPNTSFAARVIAVISILFIVLSTIALTLNTLPQLQH--IDNGT 497
            ..|..:.|..:::|..:   .|:|.:|.||:::|.:|::|:::|.:.|..:|||..::  .||.:
Human   141 RPGGAEAAPSRRWLERMRRTFEEPTSSLAAQILASVSVVFVIVSMVVLCASTLPDWRNAAADNRS 205

  Fly   498 PQDNPQLA---------MVEAVCITWFTLEYILRFSASPDKWKFFKGGLNIIDLLAILPYFVS-L 552
            ..|..:.:         ::||:||.|||.|.|:||..|.:|.:|.|..|||||||||.||::| |
Human   206 LDDRSRYSAGPGREPSGIIEAICIGWFTAECIVRFIVSKNKCEFVKRPLNIIDLLAITPYYISVL 270

  Fly   553 FLLETNKNATDQFQDVRRVVQVFRIMRILRILKLARHSTGLQSLGFTLRNSYKELGLLMLFLAMG 617
            ..:.|.:|:  |.|.....::|.|:|||..::|||||..|||:||.||:..|:|:.:|::|:.:.
Human   271 MTVFTGENS--QLQRAGVTLRVLRMMRIFWVIKLARHFIGLQTLGLTLKRCYREMVMLLVFICVA 333

  Fly   618 VLIFSSLAYFAEK----DEKDTKFVSIPETFWWAGITMTTVGYGDIYPTTALGKVIGTVCCICGV 678
            :.|||:|:...|.    :..:..|.|||...||..|:||||||||:||.|..|:::|.||.:.|:
Human   334 MAIFSALSQLLEHGLDLETSNKDFTSIPAACWWVIISMTTVGYGDMYPITVPGRILGGVCVVSGI 398

  Fly   679 LVIALPIPIIVNNFAEFYKNQMRREKALKRREA 711
            :::||||..|.::|.:.|..       ||.|.|
Human   399 VLLALPITFIYHSFVQCYHE-------LKFRSA 424

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShabNP_001189037.1 BTB 309..416 CDD:197585 44/107 (41%)
BTB_2 309..408 CDD:280393 41/99 (41%)
Ion_trans 501..700 CDD:278921 88/212 (42%)
Ion_trans_2 613..696 CDD:285168 35/86 (41%)
KCNG3NP_579875.1 BTB_POZ_KCNG3 11..122 CDD:349729 45/110 (41%)
Ion_trans 219..420 CDD:395416 88/209 (42%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 373..378 4/4 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2126
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D818306at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11537
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X19
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
54.920

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