DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Shab and Kcns1

DIOPT Version :10

Sequence 1:NP_001189037.1 Gene:Shab / 38352 FlyBaseID:FBgn0262593 Length:1607 Species:Drosophila melanogaster
Sequence 2:NP_032461.2 Gene:Kcns1 / 16538 MGIID:1197019 Length:497 Species:Mus musculus


Alignment Length:540 Identity:190/540 - (35%)
Similarity:294/540 - (54%) Gaps:86/540 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   298 MIAQSKAVNSRV---------SINVGGVRHEVLWRTLERLPHTRLGRLRECTTHEAIVELCDDYS 353
            |:::.....|||         .:||||||..:..|.|.|.|.||||||:...:.|....|||||.
Mouse     1 MVSEFPGPGSRVPWRPRDEALRVNVGGVRRLLSARALARFPGTRLGRLQAAASEEQARRLCDDYD 65

  Fly   354 LADNEYFFDRHPKSFSSILNFYRTGKLHIVDEMCVLAFSDDLEYWGVDELYLESCCQHKYHQR-- 416
            .|.:|::|||||..|..:|:|||||.||::||:||.||..:.:|||:.|..|.:||:.:|.:|  
Mouse    66 AAAHEFYFDRHPGFFLGLLHFYRTGHLHVLDELCVFAFGQEADYWGLGENALATCCRARYLERRV 130

  Fly   417 -KENVHEEMRKEAESLR---------QRDEEEFGEGKCAEYQKYLWELLEKPNTSFAARVIAVIS 471
             :....:|......|:.         ||:...:|..:|...::.||..:|.|..|..:::.:.:|
Mouse   131 ARPRAWDEDSDAPSSVDPCPDEISDVQRELARYGAARCGRLRRRLWLTMENPGYSLPSKLFSCVS 195

  Fly   472 ILFIVLSTIALTLNTLPQLQHIDNGTP-------------QDNPQLAMVEAVCITWFTLEYILRF 523
            |..::.|..|:.:::||:.|..:....             :|:|.|..:|..||.||:.|...|.
Mouse   196 IGVVLASIAAMCIHSLPEYQAREAAAAVAAVAAGRSAEEVRDDPVLRRLEYFCIAWFSFEVSSRL 260

  Fly   524 SASPDKWKFFKGGLNIIDLLAILPYFVSLF---LLETNKNAT-DQFQDVRRVVQVFRIMRILRIL 584
            ..:|....||...||:||::::||::::|.   .|...:.|: ::..|:.:||||||:|||.|:|
Mouse   261 LLAPSTRNFFCHPLNLIDIVSVLPFYLTLLAGAALGDQRGASGEELGDLGKVVQVFRLMRIFRVL 325

  Fly   585 KLARHSTGLQSLGFTLRNSYKELGLLMLFLAMGVLIFSSLAYFAEKDEKDTKFVSIPETFWWAGI 649
            |||||||||:|||.||::||:|:|:|:|:||:||.:||.:||.||  |::..|.:||..:||..:
Mouse   326 KLARHSTGLRSLGATLKHSYREVGILLLYLAVGVSVFSGVAYTAE--EENEGFHTIPACWWWGTV 388

  Fly   650 TMTTVGYGDIYPTTALGKVIGTVCCICGVLVIALPIPIIVNNFAEFYKNQMRREKALKRREALDR 714
            :||||||||:.|.|..||:..:.|.:.|:||:||||.||.|.|:.||    ||:|||        
Mouse   389 SMTTVGYGDVVPETVGGKLAASGCILGGILVVALPITIIFNKFSHFY----RRQKAL-------- 441

  Fly   715 AKREGSIVSFHHINLKDAFAKSMDLIDVIVDTGKQTNVVHPKGKRQSTPNIGRQTLDVQSAPGHN 779
               |.::.|......:|..:....:.||.::|.:.|:                            
Mouse   442 ---EAAVRSSGQREFEDLLSSVDGVSDVSLETSRDTS---------------------------- 475

  Fly   780 LSQTDGNSTEGESTSGRNPA 799
               .:|.||:.|:.:.|.||
Mouse   476 ---QEGRSTDLETQAPREPA 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShabNP_001189037.1 BTB_POZ_Shab-like 306..414 CDD:349720 54/116 (47%)
Ion_trans 464..700 CDD:459842 103/252 (41%)
Kcns1NP_032461.2 BTB_POZ 21..126 CDD:453885 51/104 (49%)
Ion_trans 188..439 CDD:459842 105/256 (41%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 392..397 4/4 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 464..497 11/60 (18%)

Return to query results.
Submit another query.