DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shab and Kcnk5

DIOPT Version :10

Sequence 1:NP_001189037.1 Gene:Shab / 38352 FlyBaseID:FBgn0262593 Length:1607 Species:Drosophila melanogaster
Sequence 2:NP_067517.1 Gene:Kcnk5 / 16529 MGIID:1336175 Length:502 Species:Mus musculus


Alignment Length:395 Identity:78/395 - (19%)
Similarity:139/395 - (35%) Gaps:108/395 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   597 GFTLRNSYKELGLLMLFLAMGVLIFSSLAYFAEKDEKDTKFVSIPETFWWAGITMTTVGYGD--- 658
            |.:||.:  ::....:|:..|||:...:..|.....::..::   |..:::.||::|:|:||   
Mouse   152 GVSLRKA--QITCTAIFIVWGVLVHLVIPPFVFMVTEEWNYI---EGLYYSFITISTIGFGDFVA 211

  Fly   659 -IYPTT---ALGKVIGTVCCICGVLVIALPIPIIVNNFAEFYKNQMRREKALKRREALDRAKREG 719
             :.|:.   ||.:....:....|:..::|.:...|:.|.|.:       ||:|:|    |.:|:.
Mouse   212 GVNPSANYHALYRYFVELWIYLGLAWLSLFVNWKVSMFVEVH-------KAIKKR----RRRRKE 265

  Fly   720 SIVSFHHINLKDAFAKSMDLIDVIVDTGKQTNVVHPKGKRQSTPN-----IGRQTLDVQS----- 774
            |..|..|.......|.|        ...|..|:.....|::.|.|     ||::.:....     
Mouse   266 SFESSPHSRKALQMAGS--------TASKDVNIFSFLSKKEETYNDLIKQIGKKAMKTSGGGERV 322

  Fly   775 -APGHNLS-QTDGNSTEGES-------TSGRNPATTGTG-CYKNYDHVANLRNSNLHNRRGSSSE 829
             .|||.|. |.|...|...|       :..|.|:..... ..||..||:.    .|....|:.:.
Mouse   323 PGPGHGLGPQGDRLPTIPASLAPLVVYSKNRVPSLEEVSQTLKNKGHVSR----PLGEEAGAQAP 383

  Fly   830 QDAVP-------------------------PYSFDNPNA----RQTSMMAMESYRREQQALLQQQ 865
            :|:..                         |..|.|.|.    .:|.:...|:.:...:..|..:
Mouse   384 KDSYQTSEVFINQLDRISEEGEPWEALDYHPLIFQNANITFENEETGLSDEETSKSSVEDNLTSK 448

  Fly   866 QQQQQQMLQMQQIQQKAPNGNGGATGGGVANNLAMVAASSAATAVATATNAS-------NASNTA 923
            :|.:|..:      .:||..:.|.           ..:|..:|..:|.:..|       |..|.|
Mouse   449 EQPEQGPM------AEAPLSSTGE-----------FPSSDESTFTSTESELSVPYEQLMNEYNKA 496

  Fly   924 PGSEG 928
            ....|
Mouse   497 DNPRG 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShabNP_001189037.1 BTB_POZ_Shab-like 306..414 CDD:349720
Ion_trans 464..700 CDD:459842 23/109 (21%)
Kcnk5NP_067517.1 Ion_trans_2 <83..137 CDD:462301
Ion_trans_2 171..243 CDD:462301 15/74 (20%)
Blue background indicates that the domain is not in the aligned region.

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