DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shab and Kcnk4

DIOPT Version :10

Sequence 1:NP_001189037.1 Gene:Shab / 38352 FlyBaseID:FBgn0262593 Length:1607 Species:Drosophila melanogaster
Sequence 2:XP_006526780.1 Gene:Kcnk4 / 16528 MGIID:1298234 Length:427 Species:Mus musculus


Alignment Length:89 Identity:25/89 - (28%)
Similarity:38/89 - (42%) Gaps:21/89 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   596 LGFTLRNSYKEL-----------GLL-----MLFLAMGVLIFSSLAYFA-EKDEKDTKFVSIPET 643
            ||.:||.....:           ||:     :|||.:|.|:|.....|. ...|..:|.    |.
Mouse   172 LGSSLRRGIGHIEAIFLKWHVPPGLVRSLSAVLFLLIGCLLFVLTPTFVFSYMESWSKL----EA 232

  Fly   644 FWWAGITMTTVGYGDIYPTTALGK 667
            .::..:|:||||:||..|....|:
Mouse   233 IYFVIVTLTTVGFGDYVPGDGTGQ 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShabNP_001189037.1 BTB_POZ_Shab-like 306..414 CDD:349720
Ion_trans 464..700 CDD:459842 25/89 (28%)
Kcnk4XP_006526780.1 Ion_trans_2 <135..172 CDD:462301 25/89 (28%)
Ion_trans_2 210..288 CDD:462301 15/51 (29%)
PLN02983 <322..>374 CDD:215533
Blue background indicates that the domain is not in the aligned region.

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