DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shab and Kcnk3

DIOPT Version :10

Sequence 1:NP_001189037.1 Gene:Shab / 38352 FlyBaseID:FBgn0262593 Length:1607 Species:Drosophila melanogaster
Sequence 2:NP_034738.1 Gene:Kcnk3 / 16527 MGIID:1100509 Length:409 Species:Mus musculus


Alignment Length:221 Identity:43/221 - (19%)
Similarity:74/221 - (33%) Gaps:90/221 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   504 LAMVEAVCITWFTLEYILRFSASPDKWKFFKGGLNIIDLLAILPYFVSLFLLETNK-------NA 561
            ||::  ||    |..|:|             .|..:.|.|...|..:....||..:       |.
Mouse     9 LALI--VC----TFTYLL-------------VGAAVFDALESEPEMIERQRLELRQLELRARYNL 54

  Fly   562 TD-QFQDVRRVVQVFRIMRILRILKLARHSTGLQSLGFTLRNSYKELGLLMLFLAMGVLIFSSLA 625
            :: .::::.|||           |:|..|..|:|                               
Mouse    55 SEGGYEELERVV-----------LRLKPHKAGVQ------------------------------- 77

  Fly   626 YFAEKDEKDTKFVSIPETFWWAGITMTTVGYGDIYPTTALGKVIGTVCCICGVLVIALPIPII-- 688
                     .:|..   :|::|...:||:|||...|:|..|||.   |....:|.|.|.:.:.  
Mouse    78 ---------WRFAG---SFYFAITVITTIGYGHAAPSTDGGKVF---CMFYALLGIPLTLVMFQS 127

  Fly   689 ----VNNFAEFYKNQMRREKALKRRE 710
                :|.|..:..::.:|...::..|
Mouse   128 LGERINTFVRYLLHRAKRGLGMRHAE 153

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShabNP_001189037.1 BTB_POZ_Shab-like 306..414 CDD:349720
Ion_trans 464..700 CDD:459842 41/209 (20%)
Kcnk3NP_034738.1 Ion_trans_2 <73..132 CDD:462301 19/104 (18%)
Ion_trans_2 167..243 CDD:462301
Blue background indicates that the domain is not in the aligned region.

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