DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shab and Kcna6

DIOPT Version :10

Sequence 1:NP_001189037.1 Gene:Shab / 38352 FlyBaseID:FBgn0262593 Length:1607 Species:Drosophila melanogaster
Sequence 2:NP_038596.1 Gene:Kcna6 / 16494 MGIID:96663 Length:529 Species:Mus musculus


Alignment Length:474 Identity:164/474 - (34%)
Similarity:240/474 - (50%) Gaps:115/474 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   306 NSRVSINVGGVRHEVLWRTLERLPHTRLG----RLRECTTHEAIVELCDDYSLADNEYFFDRHPK 366
            :.|:.||:.|:|.|...|||...|.|.||    |:|             .:....|||||||:..
Mouse    40 SERLVINISGLRFETQLRTLSLFPDTLLGDPGRRVR-------------FFDPLRNEYFFDRNRP 91

  Fly   367 SFSSILNFYRT-GKLHIVDEMCVLAFSDDLEYWGVDELYLESCCQHKYHQRKENVHEEMRKEAES 430
            ||.:||.:|:: |:|.....:.:..|.:::.::                        ::.:||.:
Mouse    92 SFDAILYYYQSGGRLRRPVNVPLDIFMEEIRFY------------------------QLGEEALA 132

  Fly   431 LRQRDEEEFGEGKCAE-------YQKYLWELLEKPNTSFAARVIAVISILFIVLSTIALTLNTLP 488
            ..:.||....||...|       :|:.:|.|.|.|.:|..||.||::|:|.|::|.:...|.|||
Mouse   133 AFREDEGCLPEGGEDEKPLPSQPFQRQVWLLFEYPESSGPARGIAIVSVLVILISIVIFCLETLP 197

  Fly   489 QLQ---------------------HIDNGTPQDN-----------------------------PQ 503
            |.:                     |.:....:|:                             ..
Mouse   198 QFRADGRGGSNEGSGTRLSPASRSHEEEDEDEDSYAFPGSIPSGGLGTGGTSSLSTLGGSFFTDP 262

  Fly   504 LAMVEAVCITWFTLEYILRFSASPDKWKFFKGGLNIIDLLAILPYFVSLFLLETNKNATDQFQDV 568
            ..:||.:||.|||.|.::||||.|.|..||:..:|||||:||.|||::   |.|......:.|.|
Mouse   263 FFLVETLCIVWFTFELLVRFSACPSKAAFFRNIMNIIDLVAIFPYFIT---LGTELVQRHEQQSV 324

  Fly   569 R-------------RVVQVFRIMRILRILKLARHSTGLQSLGFTLRNSYKELGLLMLFLAMGVLI 620
            .             .:::|.|::|:.||.||:|||.|||.||.||:.|.:|||||:.||.:||::
Mouse   325 SGGSGQNGQQAMSLAILRVIRLVRVFRIFKLSRHSKGLQILGKTLQASMRELGLLIFFLFIGVIL 389

  Fly   621 FSSLAYFAEKDEKDTKFVSIPETFWWAGITMTTVGYGDIYPTTALGKVIGTVCCICGVLVIALPI 685
            |||..||||.|:.|:.|.|||:.||||.:|||||||||:||.|..||::|::|.|.|||.||||:
Mouse   390 FSSAVYFAEADDVDSLFPSIPDAFWWAVVTMTTVGYGDMYPMTVGGKIVGSLCAIAGVLTIALPV 454

  Fly   686 PIIVNNFAEFYKNQMRREK 704
            |:||:||..||..:..:|:
Mouse   455 PVIVSNFNYFYHRETEQEE 473

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShabNP_001189037.1 BTB_POZ_Shab-like 306..414 CDD:349720 30/112 (27%)
Ion_trans 464..700 CDD:459842 120/298 (40%)
Kcna6NP_038596.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..35
BTB_POZ_KCNA6 41..170 CDD:349714 42/165 (25%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 203..238 2/34 (6%)
Ion_trans 259..468 CDD:459842 105/211 (50%)
S4-S5 linker. /evidence=ECO:0000250|UniProtKB:P63142 360..373 7/12 (58%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 422..427 4/4 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 488..513
PDZ-binding. /evidence=ECO:0000255 527..529
Blue background indicates that the domain is not in the aligned region.

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