DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shab and LOC1275696

DIOPT Version :10

Sequence 1:NP_001189037.1 Gene:Shab / 38352 FlyBaseID:FBgn0262593 Length:1607 Species:Drosophila melanogaster
Sequence 2:XP_001688598.2 Gene:LOC1275696 / 1275696 VectorBaseID:AGAMI1_010443 Length:414 Species:Anopheles gambiae


Alignment Length:181 Identity:39/181 - (21%)
Similarity:79/181 - (43%) Gaps:39/181 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   607 LGLLMLFLAMG---VLIFSSLAYFAEKDEKDTKFVSIPETFWWAGITMTTVGYGDIYPTTALGKV 668
            :|.|.::||.|   :|::          |:|..|.   :.:::..|||||:|:||:.|:.....:
Mosquito   241 VGFLGVYLAAGTGLLLLW----------EEDWDFF---DGYYFCFITMTTIGFGDLVPSKPNYML 292

  Fly   669 IGTVCCICGVLVIALPIPIIVNNFAEFYKNQMRREKALKRREALDR-----------------AK 716
            :.|:..:.|:.:.:..|.::...:|:.::........|  .|.|.|                 .:
Mosquito   293 LCTLYILVGLALTSTIIELVRRQYAQSWQKLQALSGPL--AETLRRLGESAGTGIDVTALHNDLR 355

  Fly   717 REGSIVSF--HHINLKDAFAKSMDLIDVIVDTGKQTNVVHPKGKRQSTPNI 765
            |..::||.  .|.| |.|.||.|..::.|.:...| ::...:..::..|.:
Mosquito   356 RVLTVVSMPRRHGN-KKAQAKEMAALEAITNAILQ-DIKEKQNSQEGVPKV 404

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShabNP_001189037.1 BTB_POZ_Shab-like 306..414 CDD:349720
Ion_trans 464..700 CDD:459842 22/95 (23%)
LOC1275696XP_001688598.2 None
Blue background indicates that the domain is not in the aligned region.

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