DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Shab and LOC1270447

DIOPT Version :10

Sequence 1:NP_001189037.1 Gene:Shab / 38352 FlyBaseID:FBgn0262593 Length:1607 Species:Drosophila melanogaster
Sequence 2:XP_309142.3 Gene:LOC1270447 / 1270447 VectorBaseID:AGAMI1_011251 Length:91 Species:Anopheles gambiae


Alignment Length:62 Identity:16/62 - (25%)
Similarity:24/62 - (38%) Gaps:12/62 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   747 GKQTNVVHPKGKRQSTPNIGRQTLDVQSAPGHNLSQTDGNSTE----GESTSGRNPATTGTG 804
            ||:.|..|...:|     .||.:..:|.   |..|:....:.:    ..|...:...|||||
Mosquito     9 GKRHNKTHTLCRR-----CGRSSYHIQK---HTCSRCGYPAAKIRSYNWSEKAKRRRTTGTG 62

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShabNP_001189037.1 BTB_POZ_Shab-like 306..414 CDD:349720
Ion_trans 464..700 CDD:459842
LOC1270447XP_309142.3 PTZ00073 1..91 CDD:240257 16/62 (26%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.