DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shab and Kcns1

DIOPT Version :9

Sequence 1:NP_001189037.1 Gene:Shab / 38352 FlyBaseID:FBgn0262593 Length:1607 Species:Drosophila melanogaster
Sequence 2:NP_446406.1 Gene:Kcns1 / 117023 RGDID:621524 Length:497 Species:Rattus norvegicus


Alignment Length:540 Identity:189/540 - (35%)
Similarity:294/540 - (54%) Gaps:86/540 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   298 MIAQSKAVNSRV---------SINVGGVRHEVLWRTLERLPHTRLGRLRECTTHEAIVELCDDYS 353
            |:::.....|||         .:||||||..:..|.|.|.|.||||||:...:.|....|||||.
  Rat     1 MVSEFPGPGSRVPWRPRDEALRVNVGGVRRLLSARALARFPGTRLGRLQAAVSEEQARRLCDDYD 65

  Fly   354 LADNEYFFDRHPKSFSSILNFYRTGKLHIVDEMCVLAFSDDLEYWGVDELYLESCCQHKYHQRKE 418
            .|..|::|||||..|..:|:|||||.||::||:||.||..:.:|||:.|..|.:||:.:|.:|:.
  Rat    66 AAAREFYFDRHPGFFLGLLHFYRTGHLHVLDELCVFAFGQEADYWGLGENALATCCRARYLERRV 130

  Fly   419 NVHEEMRKEAE------------SLRQRDEEEFGEGKCAEYQKYLWELLEKPNTSFAARVIAVIS 471
            .......::::            |..||:...:|..:|...::.||..:|.|..|..:::.:.:|
  Rat   131 TRPRAWDEDSDAPSSVDPCPDEISDVQRELARYGAARCGRLRRRLWLTMENPGYSLPSKLFSCVS 195

  Fly   472 ILFIVLSTIALTLNTLPQLQHIDNGTP-------------QDNPQLAMVEAVCITWFTLEYILRF 523
            |..::.|..|:.:::||:.|..:....             :|:|.|..:|..||.||:.|...|.
  Rat   196 IGVVLASIAAMCIHSLPEYQAREAAAAVAAVAAGRSAEDVRDDPVLRRLEYFCIAWFSFEVSSRL 260

  Fly   524 SASPDKWKFFKGGLNIIDLLAILPYFVSLF---LLETNKNAT-DQFQDVRRVVQVFRIMRILRIL 584
            ..:|....||...||:||::::||::::|.   .|...:.|: ::..|:.:||||||:|||.|:|
  Rat   261 LLAPSTRNFFCHPLNLIDIVSVLPFYLTLLAGAALGDRRGASGEELGDLGKVVQVFRLMRIFRVL 325

  Fly   585 KLARHSTGLQSLGFTLRNSYKELGLLMLFLAMGVLIFSSLAYFAEKDEKDTKFVSIPETFWWAGI 649
            |||||||||:|||.||::||:|:|:|:|:||:||.:||.:||.||  ||:..|.:||..:||..:
  Rat   326 KLARHSTGLRSLGATLKHSYREVGILLLYLAVGVSVFSGVAYTAE--EKNVGFDTIPACWWWGTV 388

  Fly   650 TMTTVGYGDIYPTTALGKVIGTVCCICGVLVIALPIPIIVNNFAEFYKNQMRREKALKRREALDR 714
            :||||||||:.|.|..||:..:.|.:.|:||:||||.||.|.|:.||    ||:|||        
  Rat   389 SMTTVGYGDVVPETVAGKLAASGCILGGILVVALPITIIFNKFSHFY----RRQKAL-------- 441

  Fly   715 AKREGSIVSFHHINLKDAFAKSMDLIDVIVDTGKQTNVVHPKGKRQSTPNIGRQTLDVQSAPGHN 779
               |.::.|......:|..:....:.||.::|.::|:                            
  Rat   442 ---EAAVRSSGQREFEDLLSSVDGVSDVSLETSRETS---------------------------- 475

  Fly   780 LSQTDGNSTEGESTSGRNPA 799
               .:|.||:.|:.:...||
  Rat   476 ---QEGRSTDLETQAPSEPA 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShabNP_001189037.1 BTB 309..416 CDD:197585 53/115 (46%)
BTB_2 309..408 CDD:280393 50/107 (47%)
Ion_trans 501..700 CDD:278921 96/202 (48%)
Ion_trans_2 613..696 CDD:285168 41/82 (50%)
Kcns1NP_446406.1 BTB_2 21..120 CDD:280393 49/98 (50%)
BTB 23..125 CDD:197585 51/101 (50%)
Ion_trans 238..439 CDD:278921 98/206 (48%)
Ion_trans_2 355..433 CDD:285168 41/79 (52%)
Selectivity filter. /evidence=ECO:0000250|UniProtKB:P63142 392..397 4/4 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 464..497 10/60 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2126
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D818306at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11537
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X19
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.920

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