Sequence 1: | NP_001189037.1 | Gene: | Shab / 38352 | FlyBaseID: | FBgn0262593 | Length: | 1607 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_690887.2 | Gene: | Kcnq3 / 110862 | MGIID: | 1336181 | Length: | 873 | Species: | Mus musculus |
Alignment Length: | 871 | Identity: | 172/871 - (19%) |
---|---|---|---|
Similarity: | 303/871 - (34%) | Gaps: | 247/871 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 443 KCAEYQKYLWELLEKPNTSFAARVIAVISILFIVLSTIAL-TLNTLPQLQHIDNGTPQDNPQLAM 506
Fly 507 VEAVCITWFTLEYILRFSASP--DKWKFFKGG----------LNIIDLLAILPYFVSLFLLETNK 559
Fly 560 NATDQFQDVRRVVQVFRIMRILRILKLARHSTGLQSLGFTLRNSYKEL------GLLMLFLAMGV 618
Fly 619 LIFSSLAYFAEKD---------EKDTKFVSIPETFWWAGITMTTVGYGDIYPTTALGKVIGTVCC 674
Fly 675 ICGVLVIALPIPIIVNNFAEFYKNQMRREKALKRR----EALDRAKR-----------------E 718
Fly 719 GSIVSFHHI---NLKDAFAKSMDLID-VIVDTGKQTNVVHPKGKRQSTPNIGRQTLDVQSAPGHN 779
Fly 780 LSQTDGNSTEGESTSGRNPA--------TTGTGCYKNYDHVANLRNSNLHNRRGSSSE---QDAV 833
Fly 834 PPYSFDNPNARQTSMMAMESYRR---------EQQALLQQQQQQQQQML-QMQQIQQKAPNGNGG 888
Fly 889 ATGGGVANNLAMVAASSAATAVATATNASNASNTAPGSEGAEGGGDGDGGGVDDDNLSQAKGLPI 953
Fly 954 QMMITPGEVAELRRQV--------ALENLQNQRMDNLEQDV-----------PVEFECCFCTTKD 999
Fly 1000 FKEFTDAEGVISL--------PTSDFHK-PICLEMRLAAAGRQAGAYGLLSPLPAPLP------- 1048
Fly 1049 ------PLHGPLLALPPPPPLPPTSCAAVLLPAISQSSSTSSSYGTT------------------ 1089
Fly 1090 ---TSTTIALPLDVSLRYGATICSSSNFNHNYNNNFNTTTVGGGGNGTLLFGGNYNGSNNNNADL 1151
Fly 1152 ASVDSSDTYASCQTHPFLSQGDLTAD 1177 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Shab | NP_001189037.1 | BTB | 309..416 | CDD:197585 | |
BTB_2 | 309..408 | CDD:280393 | |||
Ion_trans | 501..700 | CDD:278921 | 62/225 (28%) | ||
Ion_trans_2 | 613..696 | CDD:285168 | 29/91 (32%) | ||
Kcnq3 | NP_690887.2 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..41 | ||
Ion_trans | 140..364 | CDD:278921 | 65/245 (27%) | ||
Ion_trans_2 | 270..354 | CDD:285168 | 30/89 (34%) | ||
Selectivity filter. /evidence=ECO:0000250 | 317..322 | 3/4 (75%) | |||
Mediates interaction with calmodulin. /evidence=ECO:0000250|UniProtKB:O43525 | 357..538 | 40/203 (20%) | |||
KCNQ_channel | 453..657 | CDD:281513 | 34/249 (14%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 575..603 | 2/37 (5%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 723..742 | 2/18 (11%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 766..873 | 16/109 (15%) | |||
KCNQC3-Ank-G_bd | 781..867 | CDD:288784 | 16/94 (17%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG2126 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |