DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shab and kcns2

DIOPT Version :9

Sequence 1:NP_001189037.1 Gene:Shab / 38352 FlyBaseID:FBgn0262593 Length:1607 Species:Drosophila melanogaster
Sequence 2:XP_004915190.2 Gene:kcns2 / 101732753 -ID:- Length:477 Species:Xenopus tropicalis


Alignment Length:443 Identity:188/443 - (42%)
Similarity:283/443 - (63%) Gaps:23/443 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly   306 NSRVSINVGGVRHEVLWRTLERLPHTRLGRLRECTTHEAIVELCDDYSLADNEYFFDRHPKSFSS 370
            ::.:||||||.:..:.:.||.|.|.|||.:|..|.:.|:|:||||||....||::|||:|:.|..
 Frog    16 DTEISINVGGYKKRLRYDTLRRFPETRLCKLLACRSKESILELCDDYDDTKNEFYFDRNPELFPY 80

  Fly   371 ILNFYRTGKLHIVDEMCVLAFSDDLEYWGVDELYLESCCQHKYHQRK---ENVHEEMRKEAESLR 432
            :|:||.|||||::.|:||.:|..::||||::|.:::|||.:.||.||   |....|...|.||..
 Frog    81 VLHFYNTGKLHVMGELCVFSFCQEIEYWGINEFFIDSCCSYSYHGRKVEPEQDQWEENSERESTT 145

  Fly   433 Q---------RDEEEFGEGKCAEYQKYLWELLEKPNTSFAARVIAVISILFIVLSTIALTLNTLP 488
            .         .|..:|........::.||..|:.|..|..:|:.:::|||.::.|.:.:.||:||
 Frog   146 SSFDEILAFYHDAAKFDRQPLGNIRRRLWLALDNPGYSILSRIFSILSILVVLGSIVTMCLNSLP 210

  Fly   489 QLQHID-NGTPQDNPQLAMVEAVCITWFTLEYILRFSASPDKWKFFKGGLNIIDLLAILPYFVSL 552
            :.|.:: ||:.:::|:..:||...|.|||||.::|||.|||...|||..|||||.::|.|::::|
 Frog   211 EFQVVNANGSVEEDPRFEIVEHFGIAWFTLELVVRFSVSPDLSLFFKHPLNIIDFISIAPFYITL 275

  Fly   553 FL-LETNKNATDQFQDVRRVVQVFRIMRILRILKLARHSTGLQSLGFTLRNSYKELGLLMLFLAM 616
            .: |....:.|  ..::.||.||.|:|||.||||||||||||:|||.||:.||:|:|||:|:|::
 Frog   276 IVNLVVESSPT--LVNLGRVAQVLRLMRIFRILKLARHSTGLRSLGATLKYSYREVGLLLLYLSV 338

  Fly   617 GVLIFSSLAYFAEKDEKDTKFVSIPETFWWAGITMTTVGYGDIYPTTALGKVIGTVCCICGVLVI 681
            |:.|||.:||..||:|.| ...:||..:|||.::||||||||:.|.|..||:..:.|.:.|:||:
 Frog   339 GISIFSVVAYTIEKEEND-GLATIPACWWWATVSMTTVGYGDVVPGTIAGKLTASACILAGILVV 402

  Fly   682 ALPIPIIVNNFAEFYKNQMRREKALKRREALDRAKREGSIVSFHHINLKDAFA 734
            .|||.:|.|.|:.||:.|.:.|.|::..:..|..|...|      :||:|.:|
 Frog   403 VLPITLIFNKFSHFYRRQKQLENAMRSCDFGDGVKDVPS------VNLRDYYA 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShabNP_001189037.1 BTB 309..416 CDD:197585 52/106 (49%)
BTB_2 309..408 CDD:280393 47/98 (48%)
Ion_trans 501..700 CDD:278921 100/199 (50%)
Ion_trans_2 613..696 CDD:285168 38/82 (46%)
kcns2XP_004915190.2 BTB_POZ_KCNS2 18..124 CDD:349734 50/105 (48%)
Ion_trans 186..421 CDD:395416 112/237 (47%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D818306at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X19
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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