DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shab and LOC100497714

DIOPT Version :9

Sequence 1:NP_001189037.1 Gene:Shab / 38352 FlyBaseID:FBgn0262593 Length:1607 Species:Drosophila melanogaster
Sequence 2:XP_012822914.1 Gene:LOC100497714 / 100497714 -ID:- Length:621 Species:Xenopus tropicalis


Alignment Length:609 Identity:205/609 - (33%)
Similarity:303/609 - (49%) Gaps:105/609 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   306 NSRVSINVGGVRHEVLWRTLERLPHTRLGRLRECTTHEAIVELCDDYSLADNEYFFDRHPKSFSS 370
            :.::.|||||:|||....||:.||.|||..|.|.......     ||....:|:||||||:.|:.
 Frog    35 SDKIVINVGGIRHETYRSTLKTLPGTRLSWLTEPDAFSNF-----DYDPKTDEFFFDRHPQVFAY 94

  Fly   371 ILNFYRTGKLHIVDEMCVLAFSDDLEYWGVDELYLESCCQHKYHQRKENVHEEMRKEAESLRQRD 435
            :||:|||||||...::|...:.::|.:||:||..:|:||...|.|.::  .||.....|:....:
 Frog    95 VLNYYRTGKLHCPADVCGPLYEEELAFWGIDETDVEACCWMNYRQHRD--AEEALDSFETPEPTE 157

  Fly   436 EEEFGE-------------GKCAEYQKYLWELLEKPNTSFAARVIAVISILFIVLSTIALTLNTL 487
            |||.|:             |:....|..:|.|.|.|.:|.|||.||..|:.||::|.....|.|.
 Frog   158 EEEDGDLKRLCLQEDGRKLGRWKRLQPKVWALFEDPYSSKAARYIAFASLFFILISITTFCLETH 222

  Fly   488 PQLQHIDNGTP----------------QDNPQLAMVEAVCITWFTLEYILRFSASPDKWKFFKGG 536
            .....::|.|.                :..|.|..||.:|:.|||.|:::|....|||.:|.|..
 Frog   223 EAFNDVNNKTEVFTQGNITRTETILEMETEPFLTYVEGICVIWFTFEFLIRVIFCPDKMEFIKSS 287

  Fly   537 LNIIDLLAILPYFVSLFLLETNKNATDQFQDVRRVVQVFRIMRILRILKLARHSTGLQSLGFTLR 601
            |||||.:||||:::.:.|...:..|.   :||...::|.|.:|||||.||.||..||:.||.|||
 Frog   288 LNIIDFVAILPFYLEIGLSGLSSKAA---KDVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHTLR 349

  Fly   602 NSYKELGLLMLFLAMGVLIFSSLAYFAEK---------DEKDTKFVSIPETFWWAGITMTTVGYG 657
            .|..|..||::|||:|||||:::.|:||:         ..|.|.|.:||..||||.:||||:|||
 Frog   350 ASTNEFLLLIIFLALGVLIFATMIYYAERIGAAPDDITGSKHTDFKNIPIGFWWAVVTMTTLGYG 414

  Fly   658 DIYPTTALGKVIGTVCCICGVLVIALPIPIIVNNFAEFYKNQMRREKALKRR-EALDRAKREGS- 720
            |:||.|..|.::|.:|.:.|||.||:|:|:|||||..:|...|.::|..|:: :.:.|..:.|| 
 Frog   415 DMYPVTWSGMLVGALCALAGVLTIAMPVPVIVNNFGMYYSLAMAKQKLPKKKNKHIPRPPQPGSP 479

  Fly   721 ------IVSFHHINLKDAFAKSM-DLIDVIVDTGKQT-----------------NVVHPKGKRQS 761
                  :.|.|.....||...:. ::|::.....||.                 ..:.|:.|...
 Frog   480 NYCKPDLQSPHRSAQGDACPLAQEEIIEINRADSKQNGDAANAALANEDCPTIDQALSPEEKSPV 544

  Fly   762 TPNIGRQTLDVQSA-----PGHNLSQTDGNSTEGESTSGRNPATTGTGCYKNYDHVANLRNSNLH 821
            ||. ||:..:...|     .|......|||..:|                  |:     ::.:|:
 Frog   545 TPG-GRERYNRDRACFLLSTGDFAHSPDGNIRKG------------------YE-----KSRSLN 585

  Fly   822 NRRGSSSEQDAVPPYS--FDNPNA 843
            :..|.|.....:.|.|  |.:|:|
 Frog   586 SIAGMSGNTLRLSPISTPFGSPSA 609

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShabNP_001189037.1 BTB 309..416 CDD:197585 46/106 (43%)
BTB_2 309..408 CDD:280393 43/98 (44%)
Ion_trans 501..700 CDD:278921 97/207 (47%)
Ion_trans_2 613..696 CDD:285168 46/91 (51%)
LOC100497714XP_012822914.1 Potassium_chann 1..29 CDD:314363
BTB_KCNC1_3 34..150 CDD:349721 49/121 (40%)
Ion_trans 199..457 CDD:366146 109/260 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D818306at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X19
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.920

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