DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shab and LOC100497714

DIOPT Version :10

Sequence 1:NP_001189037.1 Gene:Shab / 38352 FlyBaseID:FBgn0262593 Length:1607 Species:Drosophila melanogaster
Sequence 2:XP_012822914.1 Gene:LOC100497714 / 100497714 XenbaseID:XB-GENE-29083803 Length:621 Species:Xenopus tropicalis


Alignment Length:609 Identity:205/609 - (33%)
Similarity:303/609 - (49%) Gaps:105/609 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   306 NSRVSINVGGVRHEVLWRTLERLPHTRLGRLRECTTHEAIVELCDDYSLADNEYFFDRHPKSFSS 370
            :.::.|||||:|||....||:.||.|||..|.|.......     ||....:|:||||||:.|:.
 Frog    35 SDKIVINVGGIRHETYRSTLKTLPGTRLSWLTEPDAFSNF-----DYDPKTDEFFFDRHPQVFAY 94

  Fly   371 ILNFYRTGKLHIVDEMCVLAFSDDLEYWGVDELYLESCCQHKYHQRKENVHEEMRKEAESLRQRD 435
            :||:|||||||...::|...:.::|.:||:||..:|:||...|.|.::  .||.....|:....:
 Frog    95 VLNYYRTGKLHCPADVCGPLYEEELAFWGIDETDVEACCWMNYRQHRD--AEEALDSFETPEPTE 157

  Fly   436 EEEFGE-------------GKCAEYQKYLWELLEKPNTSFAARVIAVISILFIVLSTIALTLNTL 487
            |||.|:             |:....|..:|.|.|.|.:|.|||.||..|:.||::|.....|.|.
 Frog   158 EEEDGDLKRLCLQEDGRKLGRWKRLQPKVWALFEDPYSSKAARYIAFASLFFILISITTFCLETH 222

  Fly   488 PQLQHIDNGTP----------------QDNPQLAMVEAVCITWFTLEYILRFSASPDKWKFFKGG 536
            .....::|.|.                :..|.|..||.:|:.|||.|:::|....|||.:|.|..
 Frog   223 EAFNDVNNKTEVFTQGNITRTETILEMETEPFLTYVEGICVIWFTFEFLIRVIFCPDKMEFIKSS 287

  Fly   537 LNIIDLLAILPYFVSLFLLETNKNATDQFQDVRRVVQVFRIMRILRILKLARHSTGLQSLGFTLR 601
            |||||.:||||:::.:.|...:..|.   :||...::|.|.:|||||.||.||..||:.||.|||
 Frog   288 LNIIDFVAILPFYLEIGLSGLSSKAA---KDVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHTLR 349

  Fly   602 NSYKELGLLMLFLAMGVLIFSSLAYFAEK---------DEKDTKFVSIPETFWWAGITMTTVGYG 657
            .|..|..||::|||:|||||:::.|:||:         ..|.|.|.:||..||||.:||||:|||
 Frog   350 ASTNEFLLLIIFLALGVLIFATMIYYAERIGAAPDDITGSKHTDFKNIPIGFWWAVVTMTTLGYG 414

  Fly   658 DIYPTTALGKVIGTVCCICGVLVIALPIPIIVNNFAEFYKNQMRREKALKRR-EALDRAKREGS- 720
            |:||.|..|.::|.:|.:.|||.||:|:|:|||||..:|...|.::|..|:: :.:.|..:.|| 
 Frog   415 DMYPVTWSGMLVGALCALAGVLTIAMPVPVIVNNFGMYYSLAMAKQKLPKKKNKHIPRPPQPGSP 479

  Fly   721 ------IVSFHHINLKDAFAKSM-DLIDVIVDTGKQT-----------------NVVHPKGKRQS 761
                  :.|.|.....||...:. ::|::.....||.                 ..:.|:.|...
 Frog   480 NYCKPDLQSPHRSAQGDACPLAQEEIIEINRADSKQNGDAANAALANEDCPTIDQALSPEEKSPV 544

  Fly   762 TPNIGRQTLDVQSA-----PGHNLSQTDGNSTEGESTSGRNPATTGTGCYKNYDHVANLRNSNLH 821
            ||. ||:..:...|     .|......|||..:|                  |:     ::.:|:
 Frog   545 TPG-GRERYNRDRACFLLSTGDFAHSPDGNIRKG------------------YE-----KSRSLN 585

  Fly   822 NRRGSSSEQDAVPPYS--FDNPNA 843
            :..|.|.....:.|.|  |.:|:|
 Frog   586 SIAGMSGNTLRLSPISTPFGSPSA 609

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShabNP_001189037.1 BTB_POZ_Shab-like 306..414 CDD:349720 45/107 (42%)
Ion_trans 464..700 CDD:459842 109/260 (42%)
LOC100497714XP_012822914.1 Potassium_chann 1..29 CDD:431870
BTB_KCNC1_3 34..150 CDD:349721 49/121 (40%)
Ion_trans 199..457 CDD:459842 109/260 (42%)
Blue background indicates that the domain is not in the aligned region.

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