DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shab and kcnk12

DIOPT Version :10

Sequence 1:NP_001189037.1 Gene:Shab / 38352 FlyBaseID:FBgn0262593 Length:1607 Species:Drosophila melanogaster
Sequence 2:XP_002935426.2 Gene:kcnk12 / 100494329 XenbaseID:XB-GENE-1012003 Length:428 Species:Xenopus tropicalis


Alignment Length:438 Identity:82/438 - (18%)
Similarity:161/438 - (36%) Gaps:128/438 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   455 LEKPNTSFAARVIAVISILFIVL-STIALTL------------NT-LPQLQHIDNGTPQDNPQLA 505
            |.:.|..|.  ::||..:|:::. :|:..|:            || |....|..|        ::
 Frog    16 LNEDNGRFL--LLAVFILLYLIAGATVFSTIERPSEALAHTRWNTILRNFSHSFN--------IS 70

  Fly   506 MVEAVCITWFTLEYI------LRFSASPDKWKFFKGGLNIIDLLAILPYFVSLFLLETNKNATDQ 564
            ::|   :..|..:|.      :|..|...:|. |.|..          |||...:.......|..
 Frog    71 VLE---LRSFLKDYEAAMAAGIRADALRPRWD-FTGAF----------YFVGTVVSTIGFGMTTP 121

  Fly   565 FQDVRRVVQVF------------------RIMRILRILKLARHSTGLQSLGF---TLR--NSYKE 606
            .....:|..:|                  ||:.:|..:..|.|...|:..|.   |:|  ::..|
 Frog   122 ATITGKVFLIFYGLFGCAGTILFFNLFLERIISLLAFVMKACHERRLRRSGLLPPTVRRGSAVSE 186

  Fly   607 LGLL----------MLFLAMGVLIFSSLAYFAEKDEKDTKFVSIPETFWWAGITMTTVGYGD--- 658
            :..|          ||.|.:..:|.|..|.......:...::   ::.::..:|.:|:|:||   
 Frog   187 VDSLVGWKPSVYHVMLILGIFAIILSCCASAMYTPVEGWNYI---DSLYYCFVTFSTIGFGDLVS 248

  Fly   659 ----IYPTTALGK------VIGTVCCICGVL-VIALPIPIIVNNFAEFYK----NQMRREKA-LK 707
                :|....|.:      ::..||||..:. ||::.|..::|...:.::    |:..:..| |.
 Frog   249 SQNAVYQYQGLYRFGNFMFILLGVCCIYSLFNVISIVIKQVLNWLLKKFRCRCCNKCHKSNARLG 313

  Fly   708 RREALDRAKR------------------EGSIVSFHHINLKDAFAKSMDLIDVIVDTGKQTNVVH 754
            ||.|:....|                  ||..:|...|:::|..|.:...:.::.....:|...:
 Frog   314 RRNAITPGSRFRRNPLSVETDGNYDSDTEGRRLSGEMISMRDLTASNKVSLAILQKQLSETANGY 378

  Fly   755 PK----GKRQSTPNIGRQTLDVQSAPGHNLSQTDGNSTEGESTSGRNP 798
            |:    ..||:..:.|...|.:.:   :.|::|    ::...:|.:.|
 Frog   379 PRTVCINTRQNGFSGGVGALAIMN---NRLAET----SDSRYSSSKTP 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShabNP_001189037.1 BTB_POZ_Shab-like 306..414 CDD:349720
Ion_trans 464..700 CDD:459842 57/306 (19%)
kcnk12XP_002935426.2 Ion_trans_2 86..153 CDD:462301 12/77 (16%)
Ion_trans_2 206..288 CDD:462301 17/84 (20%)
Blue background indicates that the domain is not in the aligned region.

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