DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shab and LOC100494007

DIOPT Version :10

Sequence 1:NP_001189037.1 Gene:Shab / 38352 FlyBaseID:FBgn0262593 Length:1607 Species:Drosophila melanogaster
Sequence 2:XP_002938608.1 Gene:LOC100494007 / 100494007 XenbaseID:XB-GENE-29082003 Length:500 Species:Xenopus tropicalis


Alignment Length:442 Identity:161/442 - (36%)
Similarity:270/442 - (61%) Gaps:28/442 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   309 VSINVGGVRHEVLWRTLERLPHTRLGRLRECTTHEAIVELCDDYSLADNEYFFDRHPKSFSSILN 373
            :::||||.:.::.:|...|.|.||:|:|..|:.....::||||:|:..|||||||.|..|..|.:
 Frog    67 LNLNVGGKKFQIDYRVAARYPSTRIGKLAACSDLVKRLDLCDDFSVQMNEYFFDRDPVVFYYIFH 131

  Fly   374 FYRTGKLHIVDEMCVLAFSDDLEYWGVDELYLESCCQHKYHQRKENVHEEMRKEAE---SLRQRD 435
            |||.|.|.|:||:|...|.:::||||:...|.:.||...:.:.::.:.|.::.|.:   .:.:.|
 Frog   132 FYRCGILWIMDELCPHNFLEEIEYWGLHLKYTQRCCHILFEEHQDEIMEYIKTERDLQAEVERHD 196

  Fly   436 EEEFGEGK-CAEYQKYLWELLEKPNTSFAARVIAVISILFIVLSTIALTLNTLPQLQHID-NGTP 498
            .|:..||| ..:::..:|.|:|.|.:|..|::|||:|.:|:::|.:|:.|:|:.:||... ||  
 Frog   197 HEKHFEGKWLGDFKIKMWNLVENPYSSVQAKIIAVLSSIFVLISIVAMCLSTVDELQDTSVNG-- 259

  Fly   499 QDNPQLAMVEAVCITWFTLEYILRFSASPDKWKFFKGGLNIIDLLAILPYFVSLFL------LET 557
              ...:..||.||:.:||:|||:|..::||..:|.:..:||:||:||||:::.:..      :|.
 Frog   260 --KAYMEYVETVCVIFFTVEYIMRLFSTPDVKRFLRTAMNIVDLVAILPFYIQIIFESFAEDVEI 322

  Fly   558 NKNATD-----QFQDVRRVVQVFRIMRILRILKLARHSTGLQSLGFTLRNSYKELGLLMLFLAMG 617
            :.:..|     :...|.:::::.|:|||.||||||||||||::.|||:|..|:::..|.||:|||
 Frog   323 HLHHGDIEKMERLGQVGKMLKIIRLMRIFRILKLARHSTGLRAFGFTIRQCYQQVCCLFLFIAMG 387

  Fly   618 VLIFSSLAYFAEKDEKDTKFVSIPETFWWAGITMTTVGYGDIYPTTALGKVIGTVCCICGVLVIA 682
            :..||:|.:..|.|...|.|.|||.|:|||.::::||||||..|.:.||:::..:|...|:::..
 Frog   388 IFTFSALMHSVEHDVPGTSFTSIPGTWWWAAVSISTVGYGDTVPNSFLGRIVAFLCISFGIILNG 452

  Fly   683 LPIPIIVNNFAEFYKNQMRREKALKRREALDRAKREGSIVSFHHINLKDAFA 734
            :||.|:.|.|::||..       ||..|::...| .|:.:.|....:|...|
 Frog   453 MPISILYNRFSDFYAK-------LKAHESMSTVK-VGTKIRFKERVMKKVTA 496

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShabNP_001189037.1 BTB_POZ_Shab-like 306..414 CDD:349720 44/104 (42%)
Ion_trans 464..700 CDD:459842 97/247 (39%)
LOC100494007XP_002938608.1 BTB_POZ 67..173 CDD:453885 44/105 (42%)
Ion_trans 226..470 CDD:459842 97/254 (38%)

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