DRSC/TRiP Functional Genomics Resources

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Protein Alignment Shab and kcng3

DIOPT Version :10

Sequence 1:NP_001189037.1 Gene:Shab / 38352 FlyBaseID:FBgn0262593 Length:1607 Species:Drosophila melanogaster
Sequence 2:XP_002932441.1 Gene:kcng3 / 100485370 XenbaseID:XB-GENE-981630 Length:431 Species:Xenopus tropicalis


Alignment Length:439 Identity:163/439 - (37%)
Similarity:260/439 - (59%) Gaps:36/439 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   310 SINVGGVRHEVLWRTLERLPHTRLGRLRECTTHEAIVELCDDYSLADNEYFFDRHPKSFSSILNF 374
            ::||||.|:......::..|..|:.||..|::.:.::|:||||....||||||||.::|..|:.:
 Frog     9 TLNVGGARYSFSQEVIKDFPLRRVSRLHGCSSEQDVLEVCDDYDQERNEYFFDRHSEAFGFIMMY 73

  Fly   375 YRTGKLHIVDEMCVLAFSDDLEYWGVDELYLESCCQHKYHQRKENVHEEMRKEA---ESLRQRDE 436
            .:.|||..|.:||.|:|.:::.|||::...||.|||.:..:|..:.:..|..|:   ||...:||
 Frog    74 VKYGKLRFVPQMCELSFYNEMIYWGLERSQLEYCCQRRLDERMSDTYTYMSDESKPDESCNLKDE 138

  Fly   437 EEFGEGKCAEYQKYLWE-----LLEKPNTSFAARVIAVISILFIVLSTIALTLNTLPQLQHIDNG 496
            ::..:.:....:|  |:     ..|:|.:|.||:::|||||:|:::|.:.|..:|||..:...|.
 Frog   139 QQQQQQQGPSDKK--WKERMRITFEEPTSSLAAQILAVISIIFVIVSMVVLCASTLPDWKTAQNH 201

  Fly   497 TPQDNPQLA-------MVEAVCITWFTLEYILRFSASPDKWKFFKGGLNIIDLLAILPYFVS-LF 553
            :.:::...|       ::||:||.|||.|.|:||..|.||.:|.|..|||||||||.||:|| |.
 Frog   202 SAEEHRYTASLWEPSGIIEAICIGWFTAECIVRFIVSKDKCEFVKRPLNIIDLLAITPYYVSVLM 266

  Fly   554 LLETNKNATDQFQDVRRVVQVFRIMRILRILKLARHSTGLQSLGFTLRNSYKELGLLMLFLAMGV 618
            .:.|.:|  .|.|.....::|.|:|||..::|||||..|||:||.||:..|:|:.:|::|:.:.:
 Frog   267 TVFTGEN--PQLQRAGVTLRVLRMMRIFWVIKLARHFIGLQTLGLTLKRCYREMVMLLVFICVAM 329

  Fly   619 LIFSSLAYFAEK----DEKDTKFVSIPETFWWAGITMTTVGYGDIYPTTALGKVIGTVCCICGVL 679
            .||.:|:...|.    :.|:..:.|||...||..|:||||||||:||.:..|:::|.||.:.|::
 Frog   330 AIFGALSQLLEHGLDLEAKNEDYSSIPAACWWVIISMTTVGYGDMYPISVPGRILGGVCVVSGIV 394

  Fly   680 VIALPIPIIVNNFAEFYKNQMRREKALKRREALDRAKREGSIVSFHHIN 728
            ::||||..|.::|.:.|..       ||.:.|     |.|..:|...:|
 Frog   395 LLALPITFIYHSFVQCYHE-------LKFKSA-----RYGRSLSNEFLN 431

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ShabNP_001189037.1 BTB_POZ_Shab-like 306..414 CDD:349720 41/103 (40%)
Ion_trans 464..700 CDD:459842 102/247 (41%)
kcng3XP_002932441.1 BTB_POZ_KCNG3 8..118 CDD:349729 42/108 (39%)
Ion_trans 169..415 CDD:459842 102/254 (40%)

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